Variant report

Variant rs61930080
Chromosome Location chr12:86228061-86228062
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:41 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:86199800-86228200 Weak transcription Left Ventricle heart
2 chr12:86219800-86229400 Weak transcription Stomach Mucosa stomach
3 chr12:86223200-86229600 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
4 chr12:86223800-86229000 Weak transcription HSMM muscle
5 chr12:86224200-86228200 Weak transcription NH-A brain
6 chr12:86224200-86228200 Weak transcription Osteobl bone
7 chr12:86224800-86230400 Active TSS Breast Myoepithelial Primary Cells Breast
8 chr12:86225200-86229400 Weak transcription NHDF-Ad bronchial
9 chr12:86225800-86228200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
10 chr12:86225800-86228200 Weak transcription Adipose Nuclei Adipose
11 chr12:86226000-86228400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
12 chr12:86226400-86228200 Weak transcription Fetal Heart heart
13 chr12:86226800-86230400 Active TSS Foreskin Keratinocyte Primary Cells skin03 Skin
14 chr12:86227200-86228200 Active TSS Fetal Lung lung
15 chr12:86227200-86229200 Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
16 chr12:86227200-86230600 Active TSS Right Atrium heart
17 chr12:86227400-86230200 Active TSS HMEC breast
18 chr12:86227600-86228400 Flanking Active TSS Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
19 chr12:86227600-86230400 Active TSS Foreskin Keratinocyte Primary Cells skin02 Skin
20 chr12:86227600-86230600 Flanking Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
21 chr12:86227800-86228400 Enhancers iPS-20b Cell Line embryonic stem cell
22 chr12:86227800-86228400 Enhancers Colon Smooth Muscle Colon
23 chr12:86227800-86228400 Enhancers Fetal Intestine Small intestine
24 chr12:86227800-86228600 Enhancers iPS-18 Cell Line embryonic stem cell
25 chr12:86227800-86228800 Enhancers Muscle Satellite Cultured Cells --
26 chr12:86227800-86229400 Enhancers HUES64 Cell Line embryonic stem cell
27 chr12:86227800-86230400 Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
28 chr12:86227800-86230400 Active TSS Aorta Aorta
29 chr12:86227800-86230400 Active TSS Fetal Stomach stomach
30 chr12:86227800-86231000 Enhancers HUES48 Cell Line embryonic stem cell
31 chr12:86228000-86228200 Enhancers iPS-15b Cell Line embryonic stem cell
32 chr12:86228000-86228200 Flanking Active TSS A549 lung
33 chr12:86228000-86228200 Active TSS NHEK skin
34 chr12:86228000-86228400 Flanking Active TSS HUES6 Cell Line embryonic stem cell
35 chr12:86228000-86228400 Active TSS Ovary ovary
36 chr12:86228000-86228800 Enhancers Rectal Smooth Muscle rectum
37 chr12:86228000-86229000 Flanking Active TSS HUVEC blood vessel
38 chr12:86228000-86230200 Active TSS Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
39 chr12:86228000-86230400 Active TSS Duodenum Smooth Muscle Duodenum
40 chr12:86228000-86230400 Active TSS Hela-S3 cervix
41 chr12:86228000-86230600 Active TSS Fetal Kidney kidney

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