Variant report

Variant	rs61991029
Chromosome Location	chr8:109760359-109760360
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 58 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:57)

rs_ID	r²[population]
rs10137074	0.81[AMR][1000 genomes];0.85[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs10138214	0.86[AMR][1000 genomes];0.89[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs10146746	0.83[AMR][1000 genomes];0.86[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs10146907	0.83[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs10147210	0.83[AMR][1000 genomes];0.86[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs10149370	0.82[AMR][1000 genomes];0.85[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs10498398	0.93[AMR][1000 genomes];0.89[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs11157496	0.90[AMR][1000 genomes];0.81[ASN][1000 genomes]
rs11157497	0.90[AMR][1000 genomes];0.81[ASN][1000 genomes]
rs11157502	0.89[AMR][1000 genomes];0.90[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs11626664	0.89[AMR][1000 genomes];0.83[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs11851560	0.81[ASN][1000 genomes]
rs11852175	0.89[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs12147960	0.90[AMR][1000 genomes];0.81[ASN][1000 genomes]
rs12147964	0.90[AMR][1000 genomes];0.81[ASN][1000 genomes]
rs12147968	0.90[AMR][1000 genomes];0.81[ASN][1000 genomes]
rs12147971	0.90[AMR][1000 genomes];0.81[ASN][1000 genomes]
rs12433080	0.87[AMR][1000 genomes];0.83[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs12433096	0.83[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs12436196	0.93[AMR][1000 genomes];0.89[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs12587792	0.84[AMR][1000 genomes]
rs12589974	0.86[AMR][1000 genomes];0.89[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs1669786	0.84[AMR][1000 genomes];0.92[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs17671850	0.93[AMR][1000 genomes];0.89[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs1999615	0.83[AMR][1000 genomes];0.89[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs2415974	0.83[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs2415984	0.82[EUR][1000 genomes]
rs2415988	0.96[AMR][1000 genomes];0.90[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs34934031	0.90[AMR][1000 genomes];0.81[ASN][1000 genomes]
rs35563644	0.82[AMR][1000 genomes];0.85[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs35878497	0.90[AMR][1000 genomes];0.81[ASN][1000 genomes]
rs35957622	0.90[AMR][1000 genomes];0.81[ASN][1000 genomes]
rs36113044	0.90[AMR][1000 genomes]
rs4144029	0.82[AMR][1000 genomes];0.83[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs4424814	0.81[ASN][1000 genomes]
rs4533179	0.82[AMR][1000 genomes];0.90[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs4611376	0.82[AMR][1000 genomes];0.90[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs55708845	0.90[AMR][1000 genomes]
rs56144938	0.90[AMR][1000 genomes]
rs61991024	0.96[AMR][1000 genomes];0.90[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs62001240	0.89[AMR][1000 genomes]
rs67306515	0.81[ASN][1000 genomes]
rs7156814	0.84[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs7157724	0.86[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs7159042	0.86[EUR][1000 genomes]
rs7159729	0.96[AMR][1000 genomes];0.90[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs8007908	0.83[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs8009287	0.87[AMR][1000 genomes];0.83[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs8009432	0.82[AMR][1000 genomes];0.83[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs8014836	0.87[AMR][1000 genomes];0.84[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs8016249	0.81[ASN][1000 genomes]
rs8016371	0.82[AMR][1000 genomes];0.82[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs8017325	0.81[ASN][1000 genomes]
rs8019899	0.83[AMR][1000 genomes];0.90[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs8020647	0.93[AMR][1000 genomes];0.89[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs8022067	0.85[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs945024	0.80[AMR][1000 genomes];0.89[EUR][1000 genomes];0.87[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv831420	chr8:109712452-109916306	Active TSS Enhancers Bivalent/Poised TSS Flanking Active TSS Flanking Bivalent TSS/Enh Weak transcription Bivalent Enhancer ZNF genes & repeats Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	7 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:109755200-109762600	Weak transcription	Fetal Brain Male	brain

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