Variant report

Variant	rs61994833
Chromosome Location	chr14:63206195-63206196
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 9 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:8)

rs_ID	r²[population]
rs10141683	0.90[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs11627880	0.96[ASN][1000 genomes]
rs7141875	0.90[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs7142035	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7143550	0.90[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs7151907	0.81[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs8017931	0.88[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs8022524	0.89[AMR][1000 genomes];0.95[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv527675	chr14:63168547-63211280	Enhancers Weak transcription ZNF genes & repeats Flanking Active TSS Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:63201800-63206200	ZNF genes & repeats	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
2	chr14:63202800-63212000	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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