The 2.0 version of rSNPBase

Variant report

Variant rs62009458
Chromosome Location chr15:49155200-49155201
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:43 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr15:49127200-49166600 Weak transcription Brain Cingulate Gyrus brain
2 chr15:49148000-49157200 Weak transcription Fetal Stomach stomach
3 chr15:49148200-49156000 Weak transcription Fetal Lung lung
4 chr15:49148200-49166400 Weak transcription Brain Inferior Temporal Lobe brain
5 chr15:49148200-49166400 Weak transcription Brain Substantia Nigra brain
6 chr15:49148400-49157600 Weak transcription Stomach Smooth Muscle stomach
7 chr15:49148400-49166600 Weak transcription Brain Hippocampus Middle brain
8 chr15:49148600-49160000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
9 chr15:49148600-49169800 Weak transcription Aorta Aorta
10 chr15:49149400-49157800 Weak transcription H1 Cell Line embryonic stem cell
11 chr15:49149600-49157600 Weak transcription HUES6 Cell Line embryonic stem cell
12 chr15:49149600-49157600 Weak transcription HUES64 Cell Line embryonic stem cell
13 chr15:49149800-49157600 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
14 chr15:49151200-49157000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
15 chr15:49151200-49157400 Weak transcription NH-A brain
16 chr15:49152400-49157600 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
17 chr15:49152400-49157800 Weak transcription Muscle Satellite Cultured Cells --
18 chr15:49152400-49157800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
19 chr15:49153200-49157400 Weak transcription NHDF-Ad bronchial
20 chr15:49153600-49157000 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
21 chr15:49153600-49163400 Weak transcription Breast Myoepithelial Primary Cells Breast
22 chr15:49154000-49155200 Enhancers Hela-S3 cervix
23 chr15:49154200-49155200 Enhancers Primary neutrophils fromperipheralblood blood
24 chr15:49154600-49155200 Enhancers Foreskin Melanocyte Primary Cells skin01 Skin
25 chr15:49154600-49155200 Enhancers Fetal Thymus thymus
26 chr15:49154600-49155200 Enhancers HMEC breast
27 chr15:49154600-49155200 Enhancers Monocytes-CD14+_RO01746 blood
28 chr15:49154600-49155600 Enhancers ES-I3 Cell Line embryonic stem cell
29 chr15:49154800-49155200 Enhancers ES-UCSF4 Cell Line embryonic stem cell
30 chr15:49154800-49155200 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
31 chr15:49154800-49157600 Weak transcription Osteobl bone
32 chr15:49155000-49155200 Enhancers iPS DF 6.9 Cell Line embryonic stem cell
33 chr15:49155000-49157200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
34 chr15:49155000-49157400 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
35 chr15:49155000-49157400 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
36 chr15:49155000-49157400 Weak transcription NHLF lung
37 chr15:49155000-49157600 Weak transcription iPS-18 Cell Line embryonic stem cell
38 chr15:49155000-49158000 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
39 chr15:49155200-49157000 Weak transcription Hela-S3 cervix
40 chr15:49155200-49157600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
41 chr15:49155200-49158000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
42 chr15:49155200-49158200 Weak transcription HMEC breast
43 chr15:49155200-49158800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast

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Last update: Aug 31, 2015