Variant report
| Variant | rs62019320 |
|---|---|
| Chromosome Location | chr15:42895389-42895390 |
| allele | C/T |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr15:42874200-42896600 | Weak transcription | Hela-S3 | cervix |
| 2 | chr15:42874400-42895800 | Weak transcription | Thymus | Thymus |
| 3 | chr15:42874400-42900200 | Weak transcription | H1 Derived Mesenchymal Stem Cells | ES cell derived |
| 4 | chr15:42874400-42900200 | Weak transcription | Primary mononuclear cells fromperipheralblood | Blood |
| 5 | chr15:42874400-42900200 | Weak transcription | Lung | lung |
| 6 | chr15:42874600-42896200 | Weak transcription | Primary T cells from cord blood | blood |
| 7 | chr15:42874800-42929800 | Weak transcription | Fetal Brain Female | brain |
| 8 | chr15:42876800-42900200 | Weak transcription | HMEC | breast |
| 9 | chr15:42877000-42896000 | Weak transcription | hESC Derived CD56+ Ectoderm Cultured Cells | ES cell derived |
| 10 | chr15:42877000-42897000 | Weak transcription | Right Ventricle | heart |
| 11 | chr15:42877000-42900200 | Weak transcription | Foreskin Melanocyte Primary Cells skin01 | Skin |
| 12 | chr15:42877200-42911200 | Weak transcription | Cortex derived primary cultured neurospheres | brain |
| 13 | chr15:42879800-42898200 | Weak transcription | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
| 14 | chr15:42880800-42896800 | Weak transcription | Primary Natural Killer cells fromperipheralblood | blood |
| 15 | chr15:42881000-42896800 | Weak transcription | Foreskin Fibroblast Primary Cells skin02 | Skin |
| 16 | chr15:42883200-42897000 | Weak transcription | Left Ventricle | heart |
| 17 | chr15:42883200-42897200 | Weak transcription | Foreskin Keratinocyte Primary Cells skin03 | Skin |
| 18 | chr15:42883800-42896200 | Weak transcription | ES-UCSF4 Cell Line | embryonic stem cell |
| 19 | chr15:42884200-42897200 | Weak transcription | Muscle Satellite Cultured Cells | -- |
| 20 | chr15:42886600-42897600 | Weak transcription | Rectal Mucosa Donor 31 | rectum |
| 21 | chr15:42887600-42897800 | Weak transcription | Breast Myoepithelial Primary Cells | Breast |
| 22 | chr15:42888000-42897000 | Weak transcription | Psoas Muscle | Psoas |
| 23 | chr15:42888000-42897400 | Weak transcription | Sigmoid Colon | Sigmoid Colon |
| 24 | chr15:42888400-42897000 | Weak transcription | Placenta | Placenta |
| 25 | chr15:42888400-42897400 | Weak transcription | Aorta | Aorta |
| 26 | chr15:42888600-42897000 | Weak transcription | Fetal Adrenal Gland | Adrenal Gland |
| 27 | chr15:42888600-42897200 | Weak transcription | NHDF-Ad | bronchial |
| 28 | chr15:42888600-42897800 | Weak transcription | Brain Dorsolateral Prefrontal Cortex | brain |
| 29 | chr15:42888600-42901200 | Weak transcription | Fetal Brain Male | brain |
| 30 | chr15:42888800-42897200 | Weak transcription | HSMM | muscle |
| 31 | chr15:42888800-42901000 | Weak transcription | Brain Angular Gyrus | brain |
| 32 | chr15:42888800-42909600 | Weak transcription | IMR90 fetal lung fibroblasts Cell Line | lung |
| 33 | chr15:42888800-42911000 | Weak transcription | Ganglion Eminence derived primary cultured neurospheres | brain |
| 34 | chr15:42889000-42897000 | Weak transcription | Brain Hippocampus Middle | brain |
| 35 | chr15:42889000-42897200 | Weak transcription | Adipose Derived Mesenchymal Stem Cell Cultured Cells | ES cell derived |
| 36 | chr15:42889000-42897200 | Weak transcription | Brain Inferior Temporal Lobe | brain |
| 37 | chr15:42889000-42897200 | Weak transcription | HSMMtube | muscle |
| 38 | chr15:42889400-42896200 | Weak transcription | Rectal Smooth Muscle | rectum |
| 39 | chr15:42889600-42897200 | Weak transcription | Fetal Lung | lung |
| 40 | chr15:42889600-42897600 | Weak transcription | Fetal Kidney | kidney |
| 41 | chr15:42889600-42903600 | Weak transcription | Ovary | ovary |
| 42 | chr15:42892400-42896400 | Weak transcription | Duodenum Smooth Muscle | Duodenum |
| 43 | chr15:42893800-42895800 | ZNF genes & repeats | H9 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 44 | chr15:42894200-42895800 | Strong transcription | Foreskin Melanocyte Primary Cells skin03 | Skin |
| 45 | chr15:42894200-42896000 | ZNF genes & repeats | GM12878-XiMat | blood |
| 46 | chr15:42894200-42896400 | Strong transcription | Foreskin Fibroblast Primary Cells skin01 | Skin |
| 47 | chr15:42894400-42895800 | Genic enhancers | Primary hematopoietic stem cells short term culture | blood |
| 48 | chr15:42894400-42897400 | Enhancers | Primary hematopoietic stem cells G-CSF-mobilized Female | -- |
| 49 | chr15:42894600-42895400 | Genic enhancers | Stomach Smooth Muscle | stomach |
| 50 | chr15:42894800-42896000 | Enhancers | Primary B cells from peripheral blood | blood |
