The 2.0 version of rSNPBase

Variant report

Variant rs62093867
Chromosome Location chr18:29491636-29491637
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:123 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr18:29406200-29518600 Weak transcription Fetal Brain Male brain
2 chr18:29417600-29515600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
3 chr18:29431800-29499000 Strong transcription Monocytes-CD14+_RO01746 blood
4 chr18:29431800-29512600 Strong transcription Primary monocytes fromperipheralblood blood
5 chr18:29432600-29507600 Weak transcription iPS-15b Cell Line embryonic stem cell
6 chr18:29432600-29521400 Weak transcription Stomach Mucosa stomach
7 chr18:29457000-29505800 Weak transcription Brain Angular Gyrus brain
8 chr18:29457200-29493200 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
9 chr18:29460400-29501200 Strong transcription Liver Liver
10 chr18:29461400-29494200 Strong transcription Primary T regulatory cells fromperipheralblood blood
11 chr18:29461600-29518600 Weak transcription Psoas Muscle Psoas
12 chr18:29462000-29520000 Weak transcription Fetal Heart heart
13 chr18:29463400-29509200 Strong transcription Primary neutrophils fromperipheralblood blood
14 chr18:29468800-29492000 Weak transcription Ovary ovary
15 chr18:29469000-29511400 Weak transcription Pancreatic Islets Pancreatic Islet
16 chr18:29469600-29507000 Weak transcription Primary T killer naive cells fromperipheralblood blood
17 chr18:29472800-29512000 Strong transcription Primary Natural Killer cells fromperipheralblood blood
18 chr18:29473800-29494800 Strong transcription Primary B cells from cord blood blood
19 chr18:29473800-29503400 Strong transcription Primary B cells from peripheral blood blood
20 chr18:29474200-29510800 Weak transcription NH-A brain
21 chr18:29478600-29522000 Weak transcription ES-WA7 Cell Line embryonic stem cell
22 chr18:29479600-29518600 Weak transcription Primary T killer memory cells from peripheral blood blood
23 chr18:29480200-29491800 Weak transcription Esophagus oesophagus
24 chr18:29480200-29492000 Weak transcription Aorta Aorta
25 chr18:29480600-29511600 Weak transcription Pancreas Pancrea
26 chr18:29480600-29519400 Weak transcription Spleen Spleen
27 chr18:29480800-29511200 Weak transcription Hela-S3 cervix
28 chr18:29481400-29511600 Weak transcription Brain Inferior Temporal Lobe brain
29 chr18:29481800-29500400 Weak transcription ES-I3 Cell Line embryonic stem cell
30 chr18:29481800-29503000 Weak transcription Colon Smooth Muscle Colon
31 chr18:29482000-29506000 Weak transcription A549 lung
32 chr18:29482000-29511200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
33 chr18:29482200-29511200 Weak transcription NHLF lung
34 chr18:29482400-29511400 Weak transcription Brain Hippocampus Middle brain
35 chr18:29482400-29522000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
36 chr18:29482600-29492000 Weak transcription Cortex derived primary cultured neurospheres brain
37 chr18:29482600-29506800 Weak transcription H9 Cell Line embryonic stem cell
38 chr18:29482600-29521600 Weak transcription Rectal Smooth Muscle rectum
39 chr18:29482800-29492200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
40 chr18:29482800-29521600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
41 chr18:29483200-29506600 Weak transcription Placenta Amnion Placenta Amnion
42 chr18:29483200-29511200 Weak transcription Brain Cingulate Gyrus brain
43 chr18:29483400-29499200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
44 chr18:29484200-29492200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
45 chr18:29484200-29502200 Weak transcription Right Ventricle heart
46 chr18:29484400-29509200 Weak transcription Gastric stomach
47 chr18:29484400-29520800 Weak transcription Fetal Brain Female brain
48 chr18:29484600-29494600 Weak transcription Primary T helper 17 cells PMA-I stimulated --
49 chr18:29484800-29500400 Weak transcription Lung lung
50 chr18:29484800-29521000 Weak transcription Skeletal Muscle Male skeletal muscle

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Last update: Aug 31, 2015