The 2.0 version of rSNPBase

Variant report

Variant rs72930222
Chromosome Location chr18:29461541-29461542
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:121 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr18:29405600-29481800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
2 chr18:29406200-29518600 Weak transcription Fetal Brain Male brain
3 chr18:29408600-29471800 Strong transcription Primary Natural Killer cells fromperipheralblood blood
4 chr18:29409800-29466600 Weak transcription Gastric stomach
5 chr18:29415800-29461800 Weak transcription Fetal Heart heart
6 chr18:29417600-29515600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
7 chr18:29418400-29470400 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
8 chr18:29419000-29461800 Weak transcription Brain Cingulate Gyrus brain
9 chr18:29431800-29461800 Strong transcription Primary neutrophils fromperipheralblood blood
10 chr18:29431800-29499000 Strong transcription Monocytes-CD14+_RO01746 blood
11 chr18:29431800-29512600 Strong transcription Primary monocytes fromperipheralblood blood
12 chr18:29432400-29468200 Weak transcription Small Intestine intestine
13 chr18:29432400-29480000 Weak transcription H9 Cell Line embryonic stem cell
14 chr18:29432600-29481600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
15 chr18:29432600-29507600 Weak transcription iPS-15b Cell Line embryonic stem cell
16 chr18:29432600-29521400 Weak transcription Stomach Mucosa stomach
17 chr18:29446000-29489000 Strong transcription Fetal Thymus thymus
18 chr18:29449200-29489000 Strong transcription Adipose Nuclei Adipose
19 chr18:29450000-29464800 Strong transcription HUES6 Cell Line embryonic stem cell
20 chr18:29450200-29471800 Strong transcription Primary T cells fromperipheralblood blood
21 chr18:29450400-29462600 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
22 chr18:29451800-29465400 Strong transcription Dnd41 blood
23 chr18:29452000-29472000 Strong transcription Primary B cells from peripheral blood blood
24 chr18:29455800-29464200 Weak transcription Primary T helper naive cells from peripheral blood blood
25 chr18:29455800-29465200 Weak transcription Primary T helper 17 cells PMA-I stimulated --
26 chr18:29456000-29479200 Weak transcription Primary T killer memory cells from peripheral blood blood
27 chr18:29456000-29480000 Weak transcription Rectal Smooth Muscle rectum
28 chr18:29456200-29466600 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
29 chr18:29457000-29465200 Weak transcription HSMMtube muscle
30 chr18:29457000-29480400 Weak transcription Brain Inferior Temporal Lobe brain
31 chr18:29457000-29505800 Weak transcription Brain Angular Gyrus brain
32 chr18:29457200-29461800 Weak transcription Placenta Placenta
33 chr18:29457200-29462000 Weak transcription Stomach Smooth Muscle stomach
34 chr18:29457200-29462200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
35 chr18:29457200-29463200 Weak transcription HUES48 Cell Line embryonic stem cell
36 chr18:29457200-29463400 Weak transcription NH-A brain
37 chr18:29457200-29463800 Weak transcription Muscle Satellite Cultured Cells --
38 chr18:29457200-29465200 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
39 chr18:29457200-29468600 Weak transcription HMEC breast
40 chr18:29457200-29479600 Weak transcription Colonic Mucosa Colon
41 chr18:29457200-29493200 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
42 chr18:29457400-29462000 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
43 chr18:29457400-29479800 Weak transcription Pancreas Pancrea
44 chr18:29457400-29484800 Weak transcription NHEK skin
45 chr18:29457600-29462600 Weak transcription Lung lung
46 chr18:29457600-29464000 Weak transcription Skeletal Muscle Male skeletal muscle
47 chr18:29457600-29466600 Weak transcription Spleen Spleen
48 chr18:29457600-29479800 Weak transcription Right Ventricle heart
49 chr18:29457800-29462600 ZNF genes & repeats Primary hematopoietic stem cells blood
50 chr18:29458000-29462600 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --

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Last update: Aug 31, 2015