Variant report

Variant rs62110401
Chromosome Location chr19:52782367-52782368
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:102 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:52774000-52786600 Weak transcription Right Ventricle heart
2 chr19:52774000-52787200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
3 chr19:52774200-52786600 Weak transcription Brain Inferior Temporal Lobe brain
4 chr19:52774200-52797400 ZNF genes & repeats H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
5 chr19:52774200-52799600 Weak transcription Hela-S3 cervix
6 chr19:52774400-52786600 Weak transcription Osteobl bone
7 chr19:52774400-52787000 Weak transcription HUVEC blood vessel
8 chr19:52774400-52787400 Weak transcription NHDF-Ad bronchial
9 chr19:52774600-52782600 ZNF genes & repeats Primary hematopoietic stem cells short term culture blood
10 chr19:52774600-52783600 ZNF genes & repeats Ganglion Eminence derived primary cultured neurospheres brain
11 chr19:52774600-52783800 ZNF genes & repeats Primary T regulatory cells fromperipheralblood blood
12 chr19:52774600-52786400 Weak transcription Brain Angular Gyrus brain
13 chr19:52774600-52786600 Weak transcription Brain Cingulate Gyrus brain
14 chr19:52774600-52795800 ZNF genes & repeats Monocytes-CD14+_RO01746 blood
15 chr19:52774800-52782400 Strong transcription Foreskin Fibroblast Primary Cells skin02 Skin
16 chr19:52774800-52786400 Weak transcription Brain Substantia Nigra brain
17 chr19:52775000-52785400 Weak transcription Gastric stomach
18 chr19:52775000-52786400 Weak transcription Brain Hippocampus Middle brain
19 chr19:52775000-52786400 Weak transcription Skeletal Muscle Male skeletal muscle
20 chr19:52775000-52787400 Weak transcription HepG2 liver
21 chr19:52775200-52786600 Weak transcription Left Ventricle heart
22 chr19:52776000-52783600 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Female --
23 chr19:52776000-52783800 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --
24 chr19:52777200-52782800 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
25 chr19:52777200-52784800 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
26 chr19:52777200-52787400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
27 chr19:52777200-52794000 Weak transcription Psoas Muscle Psoas
28 chr19:52777400-52786400 Weak transcription Small Intestine intestine
29 chr19:52777400-52787400 Weak transcription Fetal Brain Male brain
30 chr19:52777600-52784800 Weak transcription HUES48 Cell Line embryonic stem cell
31 chr19:52777600-52785400 Weak transcription Adipose Nuclei Adipose
32 chr19:52777600-52786000 Weak transcription NH-A brain
33 chr19:52777600-52786800 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
34 chr19:52777800-52785400 Weak transcription H1 Cell Line embryonic stem cell
35 chr19:52777800-52785600 Weak transcription Stomach Smooth Muscle stomach
36 chr19:52777800-52785800 Weak transcription K562 blood
37 chr19:52777800-52786000 Weak transcription Skeletal Muscle Female skeletal muscle
38 chr19:52777800-52786200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
39 chr19:52777800-52786400 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
40 chr19:52777800-52786400 Weak transcription Brain Anterior Caudate brain
41 chr19:52777800-52786400 Weak transcription HSMM muscle
42 chr19:52777800-52786600 Weak transcription Colon Smooth Muscle Colon
43 chr19:52777800-52786600 Weak transcription Pancreas Pancrea
44 chr19:52777800-52786800 Weak transcription HSMMtube muscle
45 chr19:52777800-52787400 Weak transcription Stomach Mucosa stomach
46 chr19:52777800-52787800 Weak transcription HMEC breast
47 chr19:52778000-52785800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
48 chr19:52778000-52786800 Weak transcription ES-I3 Cell Line embryonic stem cell
49 chr19:52778400-52786000 Weak transcription iPS-20b Cell Line embryonic stem cell
50 chr19:52778400-52786400 Weak transcription Rectal Mucosa Donor 31 rectum

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