Variant report

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	CEBPB	chr13:29594028-29594257	K562	blood:	n/a	chr13:29594134-29594145 chr13:29594191-29594203
2	CEBPB	chr13:29594000-29594262	MCF-7	breast:	n/a	chr13:29594134-29594145 chr13:29594191-29594203
3	CEBPB	chr13:29593984-29594305	HepG2	liver:	n/a	chr13:29594134-29594145 chr13:29594191-29594203
4	CEBPB	chr13:29593975-29594283	H1-hESC	embryonic stem cell:	n/a	chr13:29594134-29594145 chr13:29594191-29594203
5	CEBPB	chr13:29594033-29594268	IMR90	lung:	n/a	chr13:29594134-29594145 chr13:29594191-29594203

Variant related genes	Relation type
MTUS2	TF binding region

rSNPs within LD-proxies of this variant (count:30)

rs_ID	r²[population]
rs11618690	0.95[ASN][1000 genomes]
rs11618708	0.95[ASN][1000 genomes]
rs17571410	0.90[ASN][1000 genomes]
rs17571928	0.94[CHB][hapmap];1.00[JPT][hapmap];0.97[ASN][1000 genomes]
rs17650122	0.94[ASN][1000 genomes]
rs186586	0.98[ASN][1000 genomes]
rs2475538	0.98[ASN][1000 genomes]
rs2479757	1.00[CHB][hapmap];0.97[CHD][hapmap];1.00[JPT][hapmap];0.85[TSI][hapmap];0.97[ASN][1000 genomes]
rs2479758	0.83[AFR][1000 genomes];0.99[AMR][1000 genomes];0.98[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs2987336	0.98[ASN][1000 genomes]
rs3011022	0.94[ASN][1000 genomes]
rs326506	1.00[CHB][hapmap];0.97[CHD][hapmap];1.00[JPT][hapmap];0.83[TSI][hapmap]
rs326507	0.94[ASN][1000 genomes]
rs326508	0.92[ASN][1000 genomes]
rs326520	0.96[AMR][1000 genomes];0.96[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs4377014	0.94[ASN][1000 genomes]
rs4769659	0.94[ASN][1000 genomes]
rs56023620	0.94[ASN][1000 genomes]
rs59155661	0.94[ASN][1000 genomes]
rs61946436	0.81[ASN][1000 genomes]
rs7329021	0.94[ASN][1000 genomes]
rs7986484	0.93[ASN][1000 genomes]
rs7992303	0.97[ASN][1000 genomes]
rs7994188	0.94[ASN][1000 genomes]
rs7999249	0.94[ASN][1000 genomes]
rs7999783	0.92[ASN][1000 genomes]
rs8000492	0.95[ASN][1000 genomes]
rs8001303	0.91[ASN][1000 genomes]
rs9508229	0.85[JPT][hapmap]
rs9783544	0.92[AMR][1000 genomes];0.98[EUR][1000 genomes];0.94[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv533835	chr13:29141132-29962069	Weak transcription Strong transcription Flanking Active TSS Bivalent/Poised TSS Enhancers Genic enhancers Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	28 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:5 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr13:29585000-29609600	Weak transcription	Pancreatic Islets	Pancreatic Islet
2	chr13:29589400-29599000	Weak transcription	Aorta	Aorta
3	chr13:29593000-29594600	Enhancers	Fetal Heart	heart
4	chr13:29593800-29595400	Enhancers	Liver	Liver
5	chr13:29594000-29596600	Enhancers	Primary T cells from cord blood	blood

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