The 2.0 version of rSNPBase

Variant report

Variant rs62174411
Chromosome Location chr2:152673956-152673957
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:125 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:152619000-152677400 Weak transcription Brain Substantia Nigra brain
2 chr2:152623000-152680000 Weak transcription Spleen Spleen
3 chr2:152632200-152679200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
4 chr2:152634000-152683400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
5 chr2:152643400-152679000 Weak transcription iPS-15b Cell Line embryonic stem cell
6 chr2:152644800-152676800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
7 chr2:152649000-152680200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
8 chr2:152654200-152683400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
9 chr2:152654400-152678000 Weak transcription ES-WA7 Cell Line embryonic stem cell
10 chr2:152654400-152679000 Weak transcription ES-I3 Cell Line embryonic stem cell
11 chr2:152655400-152675200 Strong transcription Monocytes-CD14+_RO01746 blood
12 chr2:152657000-152674800 Weak transcription Esophagus oesophagus
13 chr2:152658000-152681600 Weak transcription Stomach Mucosa stomach
14 chr2:152659000-152675000 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
15 chr2:152659400-152683000 Weak transcription Placenta Amnion Placenta Amnion
16 chr2:152660200-152675200 Strong transcription Primary hematopoietic stem cells blood
17 chr2:152661400-152683000 Weak transcription Pancreatic Islets Pancreatic Islet
18 chr2:152662200-152681000 Weak transcription Colonic Mucosa Colon
19 chr2:152662800-152683000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
20 chr2:152663200-152674400 Weak transcription Psoas Muscle Psoas
21 chr2:152663200-152680000 Weak transcription Rectal Smooth Muscle rectum
22 chr2:152663400-152682200 Weak transcription HSMMtube muscle
23 chr2:152663400-152683000 Weak transcription Brain Inferior Temporal Lobe brain
24 chr2:152664600-152679400 Weak transcription Osteobl bone
25 chr2:152665600-152674800 Weak transcription Right Atrium heart
26 chr2:152665600-152679600 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
27 chr2:152666400-152674000 Strong transcription Primary B cells from cord blood blood
28 chr2:152667800-152674400 Weak transcription Brain Hippocampus Middle brain
29 chr2:152667800-152680000 Weak transcription NHLF lung
30 chr2:152667800-152682400 Weak transcription Fetal Brain Male brain
31 chr2:152668000-152678800 Weak transcription Muscle Satellite Cultured Cells --
32 chr2:152668400-152674200 Weak transcription Fetal Intestine Small intestine
33 chr2:152668400-152674800 Weak transcription Lung lung
34 chr2:152668400-152675200 Strong transcription Primary monocytes fromperipheralblood blood
35 chr2:152668400-152680000 Weak transcription Sigmoid Colon Sigmoid Colon
36 chr2:152668400-152683200 Weak transcription Small Intestine intestine
37 chr2:152668600-152674400 Strong transcription Primary B cells from peripheral blood blood
38 chr2:152668600-152675000 Strong transcription Primary hematopoietic stem cells short term culture blood
39 chr2:152668600-152679200 Weak transcription A549 lung
40 chr2:152668800-152679200 Weak transcription Brain Germinal Matrix brain
41 chr2:152668800-152679200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
42 chr2:152668800-152680200 Weak transcription H9 Cell Line embryonic stem cell
43 chr2:152669200-152674400 Strong transcription GM12878-XiMat blood
44 chr2:152669600-152674800 Weak transcription Primary T killer naive cells fromperipheralblood blood
45 chr2:152669600-152677200 Weak transcription Brain Anterior Caudate brain
46 chr2:152669600-152679200 Weak transcription Skeletal Muscle Male skeletal muscle
47 chr2:152669800-152683200 Weak transcription Primary mononuclear cells fromperipheralblood Blood
48 chr2:152670000-152680200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
49 chr2:152670200-152683200 Weak transcription Fetal Kidney kidney
50 chr2:152670400-152674200 Weak transcription HUVEC blood vessel

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Last update: Aug 31, 2015