The 2.0 version of rSNPBase

Variant report

Variant rs62175679
Chromosome Location chr2:169600983-169600984
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:55 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:169565200-169622800 Weak transcription Liver Liver
2 chr2:169577600-169606400 Weak transcription Thymus Thymus
3 chr2:169577600-169613600 Weak transcription Fetal Kidney kidney
4 chr2:169579600-169606000 Weak transcription Pancreas Pancrea
5 chr2:169579600-169610400 Weak transcription HepG2 liver
6 chr2:169579600-169630200 Weak transcription Aorta Aorta
7 chr2:169579600-169630600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
8 chr2:169580400-169610600 Weak transcription Rectal Mucosa Donor 29 rectum
9 chr2:169580800-169604200 Weak transcription Fetal Thymus thymus
10 chr2:169580800-169610600 Weak transcription Primary B cells from cord blood blood
11 chr2:169581000-169612000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
12 chr2:169581200-169606400 Weak transcription Sigmoid Colon Sigmoid Colon
13 chr2:169581600-169601200 Weak transcription Duodenum Mucosa Duodenum
14 chr2:169581600-169610400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
15 chr2:169583800-169613000 Weak transcription Primary hematopoietic stem cells blood
16 chr2:169586000-169627600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
17 chr2:169586200-169607600 Weak transcription Fetal Stomach stomach
18 chr2:169586600-169606400 Weak transcription GM12878-XiMat blood
19 chr2:169587200-169606200 Weak transcription Right Atrium heart
20 chr2:169587800-169623200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
21 chr2:169588600-169602600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
22 chr2:169588600-169605400 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
23 chr2:169591000-169605000 Weak transcription Fetal Muscle Trunk muscle
24 chr2:169591200-169604600 Weak transcription Fetal Muscle Leg muscle
25 chr2:169591200-169604600 Weak transcription Stomach Smooth Muscle stomach
26 chr2:169591400-169605000 Weak transcription Skeletal Muscle Male skeletal muscle
27 chr2:169592200-169605000 Weak transcription Right Ventricle heart
28 chr2:169593400-169612400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
29 chr2:169593600-169601000 Weak transcription Fetal Adrenal Gland Adrenal Gland
30 chr2:169593800-169604800 Weak transcription Brain Angular Gyrus brain
31 chr2:169594000-169611000 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
32 chr2:169594400-169607600 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
33 chr2:169594800-169605200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
34 chr2:169595000-169608400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
35 chr2:169595000-169610600 Weak transcription HMEC breast
36 chr2:169595200-169621000 Weak transcription Brain Germinal Matrix brain
37 chr2:169595200-169622800 Weak transcription NHEK skin
38 chr2:169595400-169604400 Weak transcription Primary T helper cells fromperipheralblood blood
39 chr2:169595400-169604400 Weak transcription Primary T killer memory cells from peripheral blood blood
40 chr2:169595400-169604600 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
41 chr2:169596600-169602200 Weak transcription Breast Myoepithelial Primary Cells Breast
42 chr2:169597200-169608600 Weak transcription Primary monocytes fromperipheralblood blood
43 chr2:169597200-169635800 Weak transcription Ovary ovary
44 chr2:169597600-169613600 Weak transcription Rectal Mucosa Donor 31 rectum
45 chr2:169598600-169622800 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
46 chr2:169599200-169604600 Weak transcription Gastric stomach
47 chr2:169599200-169607400 Weak transcription Fetal Intestine Large intestine
48 chr2:169599400-169605000 Weak transcription Left Ventricle heart
49 chr2:169599400-169605200 Weak transcription Primary T cells from cord blood blood
50 chr2:169599800-169604400 Weak transcription Fetal Heart heart

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Last update: Aug 31, 2015