The 2.0 version of rSNPBase

Variant report

Variant rs62176781
Chromosome Location chr2:169727863-169727864
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:59 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:169698600-169744600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
2 chr2:169702200-169733000 Weak transcription ES-I3 Cell Line embryonic stem cell
3 chr2:169709800-169733400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
4 chr2:169713200-169728800 Weak transcription Primary hematopoietic stem cells blood
5 chr2:169713400-169731200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
6 chr2:169714000-169732800 Weak transcription iPS-15b Cell Line embryonic stem cell
7 chr2:169715400-169731600 Weak transcription Small Intestine intestine
8 chr2:169715400-169746200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
9 chr2:169716000-169745800 Weak transcription HSMM muscle
10 chr2:169717000-169746400 Weak transcription Primary B cells from cord blood blood
11 chr2:169719800-169733600 Weak transcription NHDF-Ad bronchial
12 chr2:169721800-169728000 Weak transcription Primary neutrophils fromperipheralblood blood
13 chr2:169722000-169728000 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
14 chr2:169722000-169728000 Weak transcription iPS-18 Cell Line embryonic stem cell
15 chr2:169722000-169728000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
16 chr2:169722000-169728000 Weak transcription HepG2 liver
17 chr2:169722000-169728000 Weak transcription K562 blood
18 chr2:169722000-169728000 Weak transcription Monocytes-CD14+_RO01746 blood
19 chr2:169722000-169728200 Weak transcription A549 lung
20 chr2:169722000-169728200 Weak transcription HUVEC blood vessel
21 chr2:169722000-169728400 Weak transcription Thymus Thymus
22 chr2:169722000-169729000 Weak transcription HMEC breast
23 chr2:169722000-169730600 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
24 chr2:169722000-169730800 Weak transcription Rectal Mucosa Donor 29 rectum
25 chr2:169722000-169730800 Weak transcription Rectal Mucosa Donor 31 rectum
26 chr2:169722000-169732800 Weak transcription Fetal Heart heart
27 chr2:169722000-169736200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
28 chr2:169722000-169741200 Weak transcription H1 Cell Line embryonic stem cell
29 chr2:169722000-169741400 Weak transcription Muscle Satellite Cultured Cells --
30 chr2:169722000-169741400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
31 chr2:169722000-169741400 Weak transcription NHEK skin
32 chr2:169722000-169741800 Weak transcription Fetal Lung lung
33 chr2:169722000-169742800 Weak transcription Fetal Muscle Trunk muscle
34 chr2:169722000-169744000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
35 chr2:169722000-169745800 Weak transcription Fetal Stomach stomach
36 chr2:169722000-169745800 Weak transcription GM12878-XiMat blood
37 chr2:169722000-169746000 Weak transcription H9 Cell Line embryonic stem cell
38 chr2:169722000-169746000 Weak transcription Fetal Intestine Large intestine
39 chr2:169722000-169746000 Weak transcription Fetal Intestine Small intestine
40 chr2:169722000-169746000 Weak transcription Fetal Muscle Leg muscle
41 chr2:169722200-169728000 Weak transcription HUES6 Cell Line embryonic stem cell
42 chr2:169722200-169730800 Weak transcription Duodenum Mucosa Duodenum
43 chr2:169722200-169741400 Weak transcription Fetal Adrenal Gland Adrenal Gland
44 chr2:169724000-169733200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
45 chr2:169727200-169730400 Strong transcription ES-UCSF4 Cell Line embryonic stem cell
46 chr2:169727400-169730200 Strong transcription iPS-20b Cell Line embryonic stem cell
47 chr2:169727600-169728000 ZNF genes & repeats HUES64 Cell Line embryonic stem cell
48 chr2:169727600-169728200 ZNF genes & repeats H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
49 chr2:169727600-169733800 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
50 chr2:169727800-169728600 Strong transcription Cortex derived primary cultured neurospheres brain

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Last update: Aug 31, 2015