The 2.0 version of rSNPBase

Variant report

Variant rs62177296
Chromosome Location chr2:179748029-179748030
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:43 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:179702200-179749200 Weak transcription Thymus Thymus
2 chr2:179710800-179782800 Weak transcription Primary T killer naive cells fromperipheralblood blood
3 chr2:179713400-179778600 Weak transcription Primary T helper naive cells from peripheral blood blood
4 chr2:179717000-179790600 Weak transcription Primary T helper cells PMA-I stimulated --
5 chr2:179728200-179753800 Weak transcription Primary T killer memory cells from peripheral blood blood
6 chr2:179729200-179749000 Weak transcription HUES64 Cell Line embryonic stem cell
7 chr2:179729400-179753600 Weak transcription H9 Cell Line embryonic stem cell
8 chr2:179730600-179749000 Weak transcription Primary T helper cells fromperipheralblood blood
9 chr2:179730800-179750600 Weak transcription Fetal Adrenal Gland Adrenal Gland
10 chr2:179730800-179756000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
11 chr2:179730800-179770800 Weak transcription Primary B cells from peripheral blood blood
12 chr2:179733200-179779200 Weak transcription Primary T cells fromperipheralblood blood
13 chr2:179733800-179754200 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
14 chr2:179735400-179760800 Weak transcription Right Ventricle heart
15 chr2:179737200-179749000 Weak transcription HUES48 Cell Line embryonic stem cell
16 chr2:179739800-179755000 Weak transcription ES-I3 Cell Line embryonic stem cell
17 chr2:179742600-179750400 Weak transcription Skeletal Muscle Female skeletal muscle
18 chr2:179743000-179750800 Weak transcription Skeletal Muscle Male skeletal muscle
19 chr2:179744600-179753600 Strong transcription Primary T regulatory cells fromperipheralblood blood
20 chr2:179745200-179749600 Strong transcription Fetal Muscle Leg muscle
21 chr2:179745400-179749000 Weak transcription HSMMtube muscle
22 chr2:179747000-179749600 Weak transcription Primary hematopoietic stem cells blood
23 chr2:179747000-179753600 Strong transcription Primary T cells from cord blood blood
24 chr2:179747200-179748200 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
25 chr2:179747200-179748400 Enhancers NHDF-Ad bronchial
26 chr2:179747200-179748600 Strong transcription Primary B cells from cord blood blood
27 chr2:179747200-179748600 Enhancers NHEK skin
28 chr2:179747200-179748600 Enhancers NHLF lung
29 chr2:179747200-179748600 Enhancers Osteobl bone
30 chr2:179747400-179748200 Strong transcription Primary T helper naive cells fromperipheralblood blood
31 chr2:179747800-179748200 Weak transcription Ovary ovary
32 chr2:179747800-179748400 Strong transcription Fetal Heart heart
33 chr2:179747800-179748600 Enhancers HUVEC blood vessel
34 chr2:179747800-179748800 Enhancers Adipose Nuclei Adipose
35 chr2:179747800-179749400 Weak transcription Psoas Muscle Psoas
36 chr2:179747800-179750800 Weak transcription Pancreas Pancrea
37 chr2:179748000-179748400 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
38 chr2:179748000-179748400 Weak transcription Left Ventricle heart
39 chr2:179748000-179748600 Enhancers Muscle Satellite Cultured Cells --
40 chr2:179748000-179749400 Enhancers HMEC breast
41 chr2:179748000-179752400 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
42 chr2:179748000-179754000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
43 chr2:179748000-179760800 Weak transcription Right Atrium heart

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Last update: Aug 31, 2015