The 2.0 version of rSNPBase

Variant report

Variant rs62190863
Chromosome Location chr2:208845666-208845667
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:79 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:208827400-208857400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
2 chr2:208834000-208864000 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
3 chr2:208834800-208865000 Weak transcription HSMMtube muscle
4 chr2:208835600-208846600 Weak transcription Primary hematopoietic stem cells blood
5 chr2:208835800-208855400 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
6 chr2:208835800-208860800 Weak transcription Small Intestine intestine
7 chr2:208836000-208878400 Weak transcription Fetal Kidney kidney
8 chr2:208838000-208848800 Weak transcription iPS-15b Cell Line embryonic stem cell
9 chr2:208839000-208848000 Weak transcription GM12878-XiMat blood
10 chr2:208839400-208848000 Weak transcription Primary hematopoietic stem cells short term culture blood
11 chr2:208840000-208863800 Weak transcription Placenta Placenta
12 chr2:208841600-208864800 Weak transcription HepG2 liver
13 chr2:208841600-208865200 Weak transcription Primary T regulatory cells fromperipheralblood blood
14 chr2:208841800-208864800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
15 chr2:208842000-208846200 Weak transcription Primary B cells from peripheral blood blood
16 chr2:208842000-208848600 Weak transcription Sigmoid Colon Sigmoid Colon
17 chr2:208842000-208852000 Weak transcription Psoas Muscle Psoas
18 chr2:208842000-208862000 Weak transcription Fetal Muscle Leg muscle
19 chr2:208842000-208864200 Weak transcription Fetal Thymus thymus
20 chr2:208842200-208845800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
21 chr2:208842200-208847200 Weak transcription Primary monocytes fromperipheralblood blood
22 chr2:208842200-208847200 Weak transcription Rectal Smooth Muscle rectum
23 chr2:208842200-208848000 Weak transcription Primary Natural Killer cells fromperipheralblood blood
24 chr2:208842200-208848000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
25 chr2:208842200-208848400 Weak transcription Rectal Mucosa Donor 29 rectum
26 chr2:208842200-208849000 Weak transcription Pancreas Pancrea
27 chr2:208842200-208850000 Weak transcription Pancreatic Islets Pancreatic Islet
28 chr2:208842200-208851800 Weak transcription Fetal Intestine Small intestine
29 chr2:208842200-208852000 Weak transcription Primary T helper 17 cells PMA-I stimulated --
30 chr2:208842200-208853400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
31 chr2:208842200-208854400 Weak transcription Brain Cingulate Gyrus brain
32 chr2:208842200-208854600 Weak transcription Primary mononuclear cells fromperipheralblood Blood
33 chr2:208842200-208856200 Weak transcription Brain Angular Gyrus brain
34 chr2:208842200-208856600 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
35 chr2:208842200-208857200 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
36 chr2:208842200-208861800 Weak transcription Adipose Nuclei Adipose
37 chr2:208842200-208861800 Weak transcription Liver Liver
38 chr2:208842200-208862000 Weak transcription Lung lung
39 chr2:208842200-208862400 Weak transcription Primary T helper cells fromperipheralblood blood
40 chr2:208842200-208862400 Weak transcription Left Ventricle heart
41 chr2:208842200-208862400 Weak transcription Ovary ovary
42 chr2:208842200-208864200 Weak transcription Fetal Brain Female brain
43 chr2:208842200-208864200 Weak transcription Fetal Lung lung
44 chr2:208842200-208864400 Weak transcription Brain Substantia Nigra brain
45 chr2:208842200-208864400 Weak transcription Rectal Mucosa Donor 31 rectum
46 chr2:208842200-208864600 Weak transcription Primary T cells fromperipheralblood blood
47 chr2:208842200-208864800 Weak transcription Primary T helper cells PMA-I stimulated --
48 chr2:208842200-208864800 Weak transcription Aorta Aorta
49 chr2:208842200-208864800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
50 chr2:208842200-208864800 Weak transcription Duodenum Mucosa Duodenum

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Last update: Aug 31, 2015