The 2.0 version of rSNPBase

Variant report

Variant rs62190898
Chromosome Location chr2:208885562-208885563
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:68 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:208854200-208889400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
2 chr2:208857200-208888000 Weak transcription Fetal Brain Male brain
3 chr2:208865200-208889000 Weak transcription Brain Substantia Nigra brain
4 chr2:208866400-208888200 Weak transcription Ovary ovary
5 chr2:208866600-208888200 Weak transcription Stomach Smooth Muscle stomach
6 chr2:208866600-208889000 Weak transcription Fetal Stomach stomach
7 chr2:208866600-208889600 Weak transcription Primary mononuclear cells fromperipheralblood Blood
8 chr2:208866800-208887200 Weak transcription Fetal Brain Female brain
9 chr2:208866800-208888200 Weak transcription Brain Inferior Temporal Lobe brain
10 chr2:208866800-208889400 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
11 chr2:208867000-208888200 Weak transcription Primary T cells fromperipheralblood blood
12 chr2:208867400-208887800 Weak transcription Breast Myoepithelial Primary Cells Breast
13 chr2:208867400-208889000 Weak transcription Primary B cells from peripheral blood blood
14 chr2:208867400-208889200 Weak transcription Primary T cells from cord blood blood
15 chr2:208871800-208889000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
16 chr2:208871800-208889600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
17 chr2:208872400-208888200 Weak transcription Brain Hippocampus Middle brain
18 chr2:208875600-208889000 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
19 chr2:208877600-208888200 Weak transcription Psoas Muscle Psoas
20 chr2:208877800-208888600 Weak transcription Primary neutrophils fromperipheralblood blood
21 chr2:208878600-208887200 Weak transcription Right Ventricle heart
22 chr2:208878600-208889600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
23 chr2:208878800-208887200 Weak transcription Brain Angular Gyrus brain
24 chr2:208878800-208888200 Weak transcription Primary T regulatory cells fromperipheralblood blood
25 chr2:208878800-208889000 Weak transcription Primary T helper naive cells from peripheral blood blood
26 chr2:208879000-208887200 Weak transcription Skeletal Muscle Female skeletal muscle
27 chr2:208879000-208888000 Weak transcription Lung lung
28 chr2:208879000-208888200 Weak transcription Pancreas Pancrea
29 chr2:208879000-208888400 Weak transcription Duodenum Smooth Muscle Duodenum
30 chr2:208879000-208889400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
31 chr2:208879000-208889400 Weak transcription Fetal Kidney kidney
32 chr2:208879200-208888200 Weak transcription Left Ventricle heart
33 chr2:208879200-208889000 Weak transcription Skeletal Muscle Male skeletal muscle
34 chr2:208879400-208889800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
35 chr2:208879600-208889200 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
36 chr2:208880000-208889000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
37 chr2:208880600-208889000 Weak transcription HepG2 liver
38 chr2:208880800-208888200 Weak transcription Fetal Adrenal Gland Adrenal Gland
39 chr2:208881200-208889600 Weak transcription Placenta Amnion Placenta Amnion
40 chr2:208882400-208889600 Weak transcription Fetal Thymus thymus
41 chr2:208882600-208889400 Weak transcription Primary T killer naive cells fromperipheralblood blood
42 chr2:208882600-208889600 Weak transcription Small Intestine intestine
43 chr2:208882800-208888200 Weak transcription Primary T helper naive cells fromperipheralblood blood
44 chr2:208882800-208889000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
45 chr2:208882800-208889400 Weak transcription Primary T helper cells PMA-I stimulated --
46 chr2:208882800-208889400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
47 chr2:208882800-208889600 Weak transcription Primary T killer memory cells from peripheral blood blood
48 chr2:208882800-208889600 Weak transcription Aorta Aorta
49 chr2:208883000-208888400 Weak transcription Primary T helper cells fromperipheralblood blood
50 chr2:208883400-208888200 Weak transcription Right Atrium heart

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Last update: Aug 31, 2015