The 2.0 version of rSNPBase

Variant report

Variant rs62232917
Chromosome Location chr22:33223462-33223463
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:75 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr22:33201000-33227400 Weak transcription Aorta Aorta
2 chr22:33201600-33226200 Weak transcription NH-A brain
3 chr22:33203200-33223600 Weak transcription Brain Cingulate Gyrus brain
4 chr22:33204800-33227800 Weak transcription Sigmoid Colon Sigmoid Colon
5 chr22:33206800-33224600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
6 chr22:33207000-33226200 Weak transcription iPS-15b Cell Line embryonic stem cell
7 chr22:33211000-33225600 Enhancers Skeletal Muscle Male skeletal muscle
8 chr22:33211000-33225800 Weak transcription HUES64 Cell Line embryonic stem cell
9 chr22:33211000-33240400 Genic enhancers Left Ventricle heart
10 chr22:33212600-33227000 Weak transcription Liver Liver
11 chr22:33213600-33227000 Weak transcription H9 Cell Line embryonic stem cell
12 chr22:33215200-33225800 Weak transcription iPS-18 Cell Line embryonic stem cell
13 chr22:33215400-33225600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
14 chr22:33216000-33226800 Weak transcription Fetal Thymus thymus
15 chr22:33216400-33225600 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
16 chr22:33216800-33223600 Weak transcription Fetal Brain Male brain
17 chr22:33217400-33226400 Weak transcription Ovary ovary
18 chr22:33217800-33226000 Weak transcription HUES48 Cell Line embryonic stem cell
19 chr22:33217800-33229000 Weak transcription NHLF lung
20 chr22:33217800-33248600 Weak transcription Gastric stomach
21 chr22:33218600-33223600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
22 chr22:33218600-33226000 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
23 chr22:33219800-33225600 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
24 chr22:33220600-33229800 Enhancers Skeletal Muscle Female skeletal muscle
25 chr22:33221200-33223800 Weak transcription Brain Anterior Caudate brain
26 chr22:33221800-33226200 Strong transcription Osteobl bone
27 chr22:33221800-33228400 Genic enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
28 chr22:33222200-33223800 Enhancers Fetal Muscle Trunk muscle
29 chr22:33222200-33224000 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
30 chr22:33222200-33226400 Enhancers Psoas Muscle Psoas
31 chr22:33222200-33236000 Enhancers Right Atrium heart
32 chr22:33222400-33223600 Enhancers HMEC breast
33 chr22:33222400-33229000 Genic enhancers Fetal Stomach stomach
34 chr22:33222600-33223600 Enhancers Fetal Brain Female brain
35 chr22:33222600-33223600 Enhancers Fetal Lung lung
36 chr22:33222600-33223800 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
37 chr22:33222600-33224000 Enhancers Breast Myoepithelial Primary Cells Breast
38 chr22:33222600-33224000 Enhancers Esophagus oesophagus
39 chr22:33222600-33224200 Genic enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
40 chr22:33222600-33224400 Enhancers HSMMtube muscle
41 chr22:33222600-33224400 Enhancers NHEK skin
42 chr22:33222600-33224600 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
43 chr22:33222600-33224600 Enhancers Lung lung
44 chr22:33222600-33224800 Enhancers Fetal Kidney kidney
45 chr22:33222600-33224800 Enhancers Rectal Smooth Muscle rectum
46 chr22:33222600-33225000 Enhancers Spleen Spleen
47 chr22:33222600-33226200 Enhancers Brain Angular Gyrus brain
48 chr22:33222600-33226400 Genic enhancers Placenta Placenta
49 chr22:33222600-33227000 Enhancers NHDF-Ad bronchial
50 chr22:33222600-33227200 Enhancers Brain Inferior Temporal Lobe brain

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Last update: Aug 31, 2015