Variant report
| Variant | rs62254279 |
|---|---|
| Chromosome Location | chr3:53187662-53187663 |
| allele | A/G |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr3:53174800-53189600 | Weak transcription | Brain Substantia Nigra | brain |
| 2 | chr3:53176400-53188000 | Enhancers | Stomach Mucosa | stomach |
| 3 | chr3:53177800-53190200 | Enhancers | Rectal Mucosa Donor 31 | rectum |
| 4 | chr3:53178000-53189600 | Enhancers | Rectal Mucosa Donor 29 | rectum |
| 5 | chr3:53178600-53190200 | Enhancers | Colonic Mucosa | Colon |
| 6 | chr3:53179000-53190000 | Enhancers | Duodenum Mucosa | Duodenum |
| 7 | chr3:53181600-53188000 | Weak transcription | Primary hematopoietic stem cells short term culture | blood |
| 8 | chr3:53182400-53187800 | Weak transcription | Small Intestine | intestine |
| 9 | chr3:53182400-53193400 | Weak transcription | Psoas Muscle | Psoas |
| 10 | chr3:53182400-53193800 | Weak transcription | Foreskin Melanocyte Primary Cells skin03 | Skin |
| 11 | chr3:53183200-53194600 | Enhancers | Gastric | stomach |
| 12 | chr3:53183400-53189000 | Enhancers | Fetal Adrenal Gland | Adrenal Gland |
| 13 | chr3:53183400-53194600 | Enhancers | Pancreas | Pancrea |
| 14 | chr3:53183600-53190600 | Enhancers | Liver | Liver |
| 15 | chr3:53183800-53189000 | Weak transcription | iPS DF 19.11 Cell Line | embryonic stem cell |
| 16 | chr3:53184200-53194400 | Enhancers | Breast Myoepithelial Primary Cells | Breast |
| 17 | chr3:53184400-53193800 | Enhancers | Adipose Nuclei | Adipose |
| 18 | chr3:53184600-53190000 | Weak transcription | Spleen | Spleen |
| 19 | chr3:53184800-53187800 | Weak transcription | Osteobl | bone |
| 20 | chr3:53184800-53188000 | Weak transcription | Fetal Intestine Large | intestine |
| 21 | chr3:53184800-53188600 | Weak transcription | Right Ventricle | heart |
| 22 | chr3:53185000-53188000 | Weak transcription | Right Atrium | heart |
| 23 | chr3:53185000-53188400 | Weak transcription | Left Ventricle | heart |
| 24 | chr3:53185200-53187800 | Weak transcription | HMEC | breast |
| 25 | chr3:53185600-53188600 | Weak transcription | Muscle Satellite Cultured Cells | -- |
| 26 | chr3:53186000-53187800 | Weak transcription | Esophagus | oesophagus |
| 27 | chr3:53186000-53189200 | Weak transcription | Hela-S3 | cervix |
| 28 | chr3:53186200-53188800 | Bivalent Enhancer | HepG2 | liver |
| 29 | chr3:53186400-53187800 | Weak transcription | Sigmoid Colon | Sigmoid Colon |
| 30 | chr3:53186800-53190200 | Enhancers | Skeletal Muscle Female | skeletal muscle |
| 31 | chr3:53187000-53189200 | Enhancers | Skeletal Muscle Male | skeletal muscle |
| 32 | chr3:53187400-53189400 | Enhancers | Foreskin Melanocyte Primary Cells skin01 | Skin |
| 33 | chr3:53187600-53187800 | Enhancers | Fetal Intestine Small | intestine |
| 34 | chr3:53187600-53187800 | Bivalent Enhancer | Fetal Muscle Trunk | muscle |
| 35 | chr3:53187600-53189000 | Enhancers | Brain Inferior Temporal Lobe | brain |
| 36 | chr3:53187600-53189600 | Enhancers | Brain Dorsolateral Prefrontal Cortex | brain |
| 37 | chr3:53187600-53189800 | Enhancers | Lung | lung |
| 38 | chr3:53187600-53190400 | Enhancers | Brain Anterior Caudate | brain |
