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Variant report
Variant
rs62260221
Chromosome Location
chr3:34917709-34917710
allele
A/G
Outlinks
Ensembl
 
UCSC
Chromatin state
Related regulatory elements
Target genes
Other information
TF binding region (count:0)
CpG islands (count:0)
Chromatin interactive region (count:1)
LncRNA region (count:1)
Mature miRNA region (count: 0)
miRNA target sites (count:0)
No data
No data
(count:1 , 50 per page) page:
1
No.
Distal block
Cell Line
Cell type
Cell Stage
1
chr3:34911721..34913497-chr3:34916113..34918111,2
K562
blood:
(count:1 , 50 per page) page:
1
No.
lncRNA name
Chromosome Location
lncRNA alias
1
lnc-CLASP2-8
chr3:34917287-34918066
NONHSAT088964
No data
No data
No data
Extended variants information (count: 4 )
Associated traits (count: 0)
rSNPs within LD-proxies of this variant (count:3)
rs_ID
r
2
[population]
rs62260220
0.95[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs62260222
1.00[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs62262163
0.85[AMR][1000 genomes];0.91[EUR][1000 genomes]
Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page:
1
No.
Variant name
Chromosome position
Chromatin state
Related regulatory elements
Target genes
Extended variants
Associated traits
1
nsv590052
chr3:34910172-34937547
Weak transcription Enhancers
TF binding regionChromatin interactive regionlncRNA
1 gene(s)
inside rSNPs
n/a
No data
Chromatin state (count:0 , 50 per page) page:
No data
Quick Search:
Input of quick search could be:
dbSNP/dbVar ID:
rs12345
/
nsv7879
a single nucleotide as 0-based coordinates:
chr1:12345
chromosomal regions:
chr1:12345-34567
what's new
New variant types
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More extended data
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