The 2.0 version of rSNPBase

Variant report

Variant rs62272198
Chromosome Location chr3:160100949-160100950
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:72 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:160055200-160103400 Weak transcription Rectal Smooth Muscle rectum
2 chr3:160061400-160109600 Weak transcription Fetal Heart heart
3 chr3:160069000-160115200 Weak transcription Brain Cingulate Gyrus brain
4 chr3:160071400-160102000 Weak transcription Small Intestine intestine
5 chr3:160073800-160108400 Weak transcription Sigmoid Colon Sigmoid Colon
6 chr3:160074800-160101400 Weak transcription Brain Angular Gyrus brain
7 chr3:160076200-160116200 Weak transcription Primary mononuclear cells fromperipheralblood Blood
8 chr3:160081200-160102200 Weak transcription HUVEC blood vessel
9 chr3:160083400-160113000 Weak transcription Cortex derived primary cultured neurospheres brain
10 chr3:160083800-160108200 Weak transcription GM12878-XiMat blood
11 chr3:160083800-160116000 Weak transcription Rectal Mucosa Donor 31 rectum
12 chr3:160084000-160104000 Weak transcription Brain Hippocampus Middle brain
13 chr3:160088800-160101400 Weak transcription Hela-S3 cervix
14 chr3:160088800-160108600 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
15 chr3:160088800-160108600 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
16 chr3:160088800-160116200 Weak transcription Primary B cells from cord blood blood
17 chr3:160088800-160116200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
18 chr3:160089000-160104000 Weak transcription Primary T killer naive cells fromperipheralblood blood
19 chr3:160091600-160105800 Weak transcription Ovary ovary
20 chr3:160092000-160113200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
21 chr3:160092200-160103200 Weak transcription K562 blood
22 chr3:160092200-160116000 Weak transcription Fetal Stomach stomach
23 chr3:160092200-160116200 Weak transcription Fetal Intestine Small intestine
24 chr3:160092200-160116600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
25 chr3:160093000-160102800 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
26 chr3:160093000-160113000 Weak transcription NHLF lung
27 chr3:160093200-160113200 Weak transcription Brain Germinal Matrix brain
28 chr3:160093600-160116000 Weak transcription Fetal Kidney kidney
29 chr3:160094600-160116000 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
30 chr3:160094800-160101200 Weak transcription Primary T cells fromperipheralblood blood
31 chr3:160094800-160104800 Weak transcription Monocytes-CD14+_RO01746 blood
32 chr3:160094800-160113000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
33 chr3:160094800-160113200 Weak transcription HSMM muscle
34 chr3:160094800-160115800 Weak transcription Primary T helper cells PMA-I stimulated --
35 chr3:160094800-160116000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
36 chr3:160094800-160116000 Weak transcription Fetal Muscle Leg muscle
37 chr3:160094800-160116600 Weak transcription Left Ventricle heart
38 chr3:160095000-160102600 Weak transcription Primary T cells from cord blood blood
39 chr3:160095000-160103800 Weak transcription Primary Natural Killer cells fromperipheralblood blood
40 chr3:160095000-160115800 Weak transcription Fetal Intestine Large intestine
41 chr3:160095000-160116000 Weak transcription Colon Smooth Muscle Colon
42 chr3:160095200-160108400 Weak transcription Primary T regulatory cells fromperipheralblood blood
43 chr3:160095200-160115000 Weak transcription Brain Inferior Temporal Lobe brain
44 chr3:160095400-160103800 Weak transcription Fetal Lung lung
45 chr3:160095400-160108600 Weak transcription Primary B cells from peripheral blood blood
46 chr3:160095400-160113200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
47 chr3:160095400-160116000 Weak transcription Primary T helper cells fromperipheralblood blood
48 chr3:160097000-160113200 Weak transcription A549 lung
49 chr3:160098200-160113400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
50 chr3:160098400-160101600 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived

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Last update: Aug 31, 2015