Variant report

Variant rs62283737
Chromosome Location chr3:195454868-195454869
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:56 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:195439000-195465200 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
2 chr3:195442200-195475000 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
3 chr3:195442400-195457800 Weak transcription Duodenum Smooth Muscle Duodenum
4 chr3:195442400-195468200 Weak transcription Primary T helper naive cells from peripheral blood blood
5 chr3:195442600-195474200 Weak transcription Primary T helper naive cells fromperipheralblood blood
6 chr3:195442800-195456400 Weak transcription Brain Anterior Caudate brain
7 chr3:195442800-195456600 Weak transcription Brain Angular Gyrus brain
8 chr3:195442800-195461600 Weak transcription Primary T helper cells fromperipheralblood blood
9 chr3:195442800-195475000 Weak transcription Brain Substantia Nigra brain
10 chr3:195443000-195456400 Weak transcription Brain Hippocampus Middle brain
11 chr3:195443000-195456400 Weak transcription Rectal Smooth Muscle rectum
12 chr3:195443000-195456600 Weak transcription Brain Cingulate Gyrus brain
13 chr3:195443000-195456600 Weak transcription Lung lung
14 chr3:195443000-195456600 Weak transcription Ovary ovary
15 chr3:195443000-195459800 Weak transcription Colon Smooth Muscle Colon
16 chr3:195443000-195468000 Weak transcription Primary T helper cells PMA-I stimulated --
17 chr3:195443200-195456400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
18 chr3:195445600-195456400 Weak transcription Brain Inferior Temporal Lobe brain
19 chr3:195445800-195456400 Weak transcription Aorta Aorta
20 chr3:195448000-195456400 Weak transcription Primary T cells from cord blood blood
21 chr3:195448000-195457800 Weak transcription Sigmoid Colon Sigmoid Colon
22 chr3:195448200-195459800 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
23 chr3:195448200-195460800 Weak transcription Pancreatic Islets Pancreatic Islet
24 chr3:195448200-195483800 Weak transcription Placenta Amnion Placenta Amnion
25 chr3:195449000-195456600 Weak transcription Breast Myoepithelial Primary Cells Breast
26 chr3:195449400-195458000 Weak transcription Placenta Placenta
27 chr3:195450000-195457800 Weak transcription Pancreas Pancrea
28 chr3:195450400-195458400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
29 chr3:195453200-195455000 Genic enhancers Fetal Intestine Small intestine
30 chr3:195453200-195455200 Enhancers Fetal Brain Male brain
31 chr3:195453800-195456400 Enhancers Fetal Intestine Large intestine
32 chr3:195454200-195455000 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
33 chr3:195454200-195455000 Flanking Active TSS Duodenum Mucosa Duodenum
34 chr3:195454200-195455000 Active TSS Esophagus oesophagus
35 chr3:195454200-195455000 Enhancers Fetal Brain Female brain
36 chr3:195454200-195455000 Enhancers Fetal Muscle Leg muscle
37 chr3:195454200-195455200 Enhancers Cortex derived primary cultured neurospheres brain
38 chr3:195454200-195455400 Enhancers Rectal Mucosa Donor 31 rectum
39 chr3:195454400-195455000 Flanking Active TSS Rectal Mucosa Donor 29 rectum
40 chr3:195454400-195455000 Enhancers Small Intestine intestine
41 chr3:195454400-195456200 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
42 chr3:195454400-195459800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
43 chr3:195454600-195455000 Enhancers Primary mononuclear cells fromperipheralblood Blood
44 chr3:195454600-195455000 Flanking Active TSS Liver Liver
45 chr3:195454600-195456000 Enhancers Fetal Adrenal Gland Adrenal Gland
46 chr3:195454600-195456600 Weak transcription Fetal Stomach stomach
47 chr3:195454600-195458000 Weak transcription Brain Germinal Matrix brain
48 chr3:195454600-195460000 Weak transcription Primary T regulatory cells fromperipheralblood blood
49 chr3:195454800-195455200 Enhancers Colonic Mucosa Colon
50 chr3:195454800-195456200 Enhancers H9 Derived Neuron Cultured Cells ES cell derived

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