Variant report

Variant rs6795171
Chromosome Location chr3:195456889-195456890
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:57 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:195439000-195465200 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
2 chr3:195442200-195475000 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
3 chr3:195442400-195457800 Weak transcription Duodenum Smooth Muscle Duodenum
4 chr3:195442400-195468200 Weak transcription Primary T helper naive cells from peripheral blood blood
5 chr3:195442600-195474200 Weak transcription Primary T helper naive cells fromperipheralblood blood
6 chr3:195442800-195461600 Weak transcription Primary T helper cells fromperipheralblood blood
7 chr3:195442800-195475000 Weak transcription Brain Substantia Nigra brain
8 chr3:195443000-195459800 Weak transcription Colon Smooth Muscle Colon
9 chr3:195443000-195468000 Weak transcription Primary T helper cells PMA-I stimulated --
10 chr3:195448000-195457800 Weak transcription Sigmoid Colon Sigmoid Colon
11 chr3:195448200-195459800 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
12 chr3:195448200-195460800 Weak transcription Pancreatic Islets Pancreatic Islet
13 chr3:195448200-195483800 Weak transcription Placenta Amnion Placenta Amnion
14 chr3:195449400-195458000 Weak transcription Placenta Placenta
15 chr3:195450000-195457800 Weak transcription Pancreas Pancrea
16 chr3:195450400-195458400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
17 chr3:195454400-195459800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
18 chr3:195454600-195458000 Weak transcription Brain Germinal Matrix brain
19 chr3:195454600-195460000 Weak transcription Primary T regulatory cells fromperipheralblood blood
20 chr3:195454800-195458200 Weak transcription Spleen Spleen
21 chr3:195454800-195459800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
22 chr3:195454800-195462000 Weak transcription Gastric stomach
23 chr3:195455000-195457800 Weak transcription Esophagus oesophagus
24 chr3:195455000-195457800 Weak transcription Fetal Brain Female brain
25 chr3:195455000-195459400 Weak transcription Fetal Muscle Leg muscle
26 chr3:195455000-195459800 Weak transcription Primary mononuclear cells fromperipheralblood Blood
27 chr3:195455000-195460000 Weak transcription Stomach Smooth Muscle stomach
28 chr3:195456000-195457000 Enhancers Duodenum Mucosa Duodenum
29 chr3:195456000-195457600 Weak transcription Fetal Adrenal Gland Adrenal Gland
30 chr3:195456200-195457200 Genic enhancers Fetal Intestine Small intestine
31 chr3:195456200-195459800 Weak transcription Left Ventricle heart
32 chr3:195456400-195457000 Strong transcription Aorta Aorta
33 chr3:195456400-195457200 Genic enhancers Fetal Intestine Large intestine
34 chr3:195456400-195459000 Strong transcription Skeletal Muscle Male skeletal muscle
35 chr3:195456400-195460600 Strong transcription Brain Inferior Temporal Lobe brain
36 chr3:195456400-195460600 Strong transcription Brain Dorsolateral Prefrontal Cortex brain
37 chr3:195456400-195460800 Strong transcription Primary T cells from cord blood blood
38 chr3:195456400-195460800 Strong transcription Brain Anterior Caudate brain
39 chr3:195456400-195460800 Strong transcription Brain Hippocampus Middle brain
40 chr3:195456400-195463600 Weak transcription Fetal Heart heart
41 chr3:195456400-195464200 Strong transcription Rectal Smooth Muscle rectum
42 chr3:195456400-195465600 Strong transcription Rectal Mucosa Donor 29 rectum
43 chr3:195456600-195457000 Strong transcription Ovary ovary
44 chr3:195456600-195457000 Strong transcription Right Ventricle heart
45 chr3:195456600-195457200 Strong transcription Brain Cingulate Gyrus brain
46 chr3:195456600-195458200 Strong transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
47 chr3:195456600-195458600 Strong transcription Adipose Nuclei Adipose
48 chr3:195456600-195458600 Strong transcription Lung lung
49 chr3:195456600-195460000 Strong transcription Fetal Stomach stomach
50 chr3:195456600-195460400 Strong transcription Skeletal Muscle Female skeletal muscle

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