The 2.0 version of rSNPBase

Variant report

Variant rs62310309
Chromosome Location chr4:79452711-79452712
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:52 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr4:79363400-79455200 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
2 chr4:79363800-79464200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
3 chr4:79378600-79455800 Weak transcription Right Ventricle heart
4 chr4:79385000-79467400 Weak transcription Fetal Brain Male brain
5 chr4:79393800-79467200 Weak transcription Skeletal Muscle Male skeletal muscle
6 chr4:79401000-79467200 Weak transcription Psoas Muscle Psoas
7 chr4:79410200-79461800 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
8 chr4:79426800-79455000 Weak transcription Esophagus oesophagus
9 chr4:79428200-79466200 Weak transcription iPS-15b Cell Line embryonic stem cell
10 chr4:79428600-79459000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
11 chr4:79430200-79456000 Weak transcription Aorta Aorta
12 chr4:79430200-79456000 Weak transcription Pancreas Pancrea
13 chr4:79430800-79454600 Weak transcription Breast Myoepithelial Primary Cells Breast
14 chr4:79435600-79455600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
15 chr4:79435600-79463000 Weak transcription Fetal Heart heart
16 chr4:79435600-79467200 Weak transcription Skeletal Muscle Female skeletal muscle
17 chr4:79440600-79465800 Weak transcription Lung lung
18 chr4:79440600-79467200 Weak transcription Left Ventricle heart
19 chr4:79440800-79456200 Weak transcription H9 Cell Line embryonic stem cell
20 chr4:79442400-79465600 Weak transcription Fetal Stomach stomach
21 chr4:79444800-79472400 Weak transcription Right Atrium heart
22 chr4:79445800-79455600 Weak transcription HepG2 liver
23 chr4:79446600-79456000 Weak transcription Fetal Intestine Large intestine
24 chr4:79446800-79453800 Strong transcription ES-UCSF4 Cell Line embryonic stem cell
25 chr4:79447000-79454600 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
26 chr4:79447800-79455600 Weak transcription Fetal Intestine Small intestine
27 chr4:79447800-79455600 Weak transcription Fetal Kidney kidney
28 chr4:79448000-79455600 Weak transcription Fetal Lung lung
29 chr4:79448200-79455600 Weak transcription HUES6 Cell Line embryonic stem cell
30 chr4:79448600-79455600 Weak transcription iPS-18 Cell Line embryonic stem cell
31 chr4:79449000-79455600 Weak transcription HUES64 Cell Line embryonic stem cell
32 chr4:79449800-79453400 Weak transcription iPS-20b Cell Line embryonic stem cell
33 chr4:79450200-79455400 Weak transcription HUES48 Cell Line embryonic stem cell
34 chr4:79450400-79455600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
35 chr4:79451000-79454600 Weak transcription H1 Cell Line embryonic stem cell
36 chr4:79451000-79455000 Weak transcription HSMMtube muscle
37 chr4:79451400-79452800 Enhancers Primary neutrophils fromperipheralblood blood
38 chr4:79451400-79462800 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
39 chr4:79451600-79452800 Weak transcription HUVEC blood vessel
40 chr4:79451600-79453200 Weak transcription NHEK skin
41 chr4:79451600-79453600 Weak transcription Muscle Satellite Cultured Cells --
42 chr4:79451600-79455000 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
43 chr4:79451600-79461600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
44 chr4:79451800-79452800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
45 chr4:79451800-79453200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
46 chr4:79451800-79453200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
47 chr4:79451800-79453200 Weak transcription HMEC breast
48 chr4:79451800-79453400 Weak transcription Hela-S3 cervix
49 chr4:79451800-79455200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
50 chr4:79451800-79463400 Weak transcription NHDF-Ad bronchial

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Last update: Aug 31, 2015