Variant report

Variant	rs62318615
Chromosome Location	chr4:76397177-76397178
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr4:76358069..76359586-chr4:76396767..76398904,2	K562	blood:

Extended variants
information (count: 6 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:3)

rs_ID	r²[population]
rs17214357	1.00[AFR][1000 genomes]
rs56077015	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs62320991	1.00[AFR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv594687	chr4:76154064-76502748	Weak transcription ZNF genes & repeats Active TSS Flanking Active TSS Enhancers Strong transcription Genic enhancers Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	27 gene(s)	inside rSNPs	diseases
2	nsv998511	chr4:76184807-76398377	Enhancers Weak transcription Strong transcription ZNF genes & repeats Bivalent Enhancer Active TSS Flanking Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	16 gene(s)	inside rSNPs	diseases
3	nsv534570	chr4:76214619-76498362	ZNF genes & repeats Flanking Active TSS Strong transcription Weak transcription Enhancers Active TSS Genic enhancers Bivalent Enhancer Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	27 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:37 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:76392000-76402400	Weak transcription	Liver	Liver
2	chr4:76392600-76434800	Weak transcription	Gastric	stomach
3	chr4:76392800-76403000	Weak transcription	Fetal Brain Female	brain
4	chr4:76394000-76406200	Weak transcription	Colon Smooth Muscle	Colon
5	chr4:76394000-76406600	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
6	chr4:76394600-76424600	Weak transcription	Right Ventricle	heart
7	chr4:76395000-76401200	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
8	chr4:76395200-76397200	Enhancers	Skeletal Muscle Male	skeletal muscle
9	chr4:76395400-76402200	Weak transcription	Primary T cells fromperipheralblood	blood
10	chr4:76395400-76405200	Weak transcription	Fetal Heart	heart
11	chr4:76395600-76405800	Weak transcription	Brain Germinal Matrix	brain
12	chr4:76395800-76399200	Weak transcription	Primary neutrophils fromperipheralblood	blood
13	chr4:76395800-76402200	Weak transcription	Primary T cells from cord blood	blood
14	chr4:76395800-76402400	Weak transcription	Ovary	ovary
15	chr4:76395800-76406600	Weak transcription	Placenta Amnion	Placenta Amnion
16	chr4:76395800-76437000	Weak transcription	Aorta	Aorta
17	chr4:76395800-76437000	Weak transcription	Lung	lung
18	chr4:76395800-76437000	Weak transcription	Pancreas	Pancrea
19	chr4:76396200-76398200	Strong transcription	Primary B cells from cord blood	blood
20	chr4:76396200-76424400	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
21	chr4:76396200-76437000	Weak transcription	Esophagus	oesophagus
22	chr4:76396400-76398600	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
23	chr4:76396400-76402200	Weak transcription	Brain Hippocampus Middle	brain
24	chr4:76396600-76398200	Weak transcription	Primary Natural Killer cells fromperipheralblood	blood
25	chr4:76396600-76403600	Weak transcription	Primary T helper memory cells from peripheral blood 1	blood
26	chr4:76396800-76397200	Enhancers	Fetal Adrenal Gland	Adrenal Gland
27	chr4:76396800-76397200	Enhancers	Left Ventricle	heart
28	chr4:76396800-76400200	Strong transcription	HSMM	muscle
29	chr4:76396800-76402400	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
30	chr4:76397000-76397600	Enhancers	Psoas Muscle	Psoas
31	chr4:76397000-76399200	Weak transcription	Primary T helper cells fromperipheralblood	blood
32	chr4:76397000-76400000	Enhancers	Breast Myoepithelial Primary Cells	Breast
33	chr4:76397000-76402000	Weak transcription	Adipose Nuclei	Adipose
34	chr4:76397000-76403200	Weak transcription	iPS-18 Cell Line	embryonic stem cell
35	chr4:76397000-76403400	Weak transcription	Duodenum Smooth Muscle	Duodenum
36	chr4:76397000-76403600	Weak transcription	Skeletal Muscle Female	skeletal muscle
37	chr4:76397000-76405200	Weak transcription	NHEK	skin

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