Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr5:36430520..36432569-chr5:36437537..36440478,3	K562	blood:

rSNPs within LD-proxies of this variant (count:23)

rs_ID	r²[population]
rs10941294	0.89[AMR][1000 genomes];0.98[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs2455269	0.89[EUR][1000 genomes]
rs2455270	0.88[EUR][1000 genomes]
rs2455271	0.86[EUR][1000 genomes]
rs2455272	0.86[EUR][1000 genomes]
rs2455275	0.80[EUR][1000 genomes]
rs2455276	0.80[EUR][1000 genomes]
rs2455280	0.80[EUR][1000 genomes]
rs2468507	0.92[EUR][1000 genomes]
rs2468508	0.88[EUR][1000 genomes]
rs2468510	0.88[EUR][1000 genomes]
rs2468513	0.86[EUR][1000 genomes]
rs2468515	0.80[EUR][1000 genomes]
rs2468517	0.84[EUR][1000 genomes]
rs2468518	0.84[EUR][1000 genomes]
rs2937558	0.88[EUR][1000 genomes]
rs2956572	0.84[EUR][1000 genomes]
rs62354544	0.96[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs62356876	0.96[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs62356878	0.96[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs62356879	0.96[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs72730760	0.82[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs7732757	0.92[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv517278	chr5:36430755-36445802	Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats	Chromatin interactive region	n/a	inside rSNPs	diseases
2	nsv597816	chr5:36431978-36443160	Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats	Chromatin interactive region	n/a	inside rSNPs	diseases
3	nsv597817	chr5:36433782-36460075	Enhancers Weak transcription Flanking Active TSS Bivalent Enhancer Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:12 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:36432800-36439200	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
2	chr5:36435800-36440800	Enhancers	Brain Anterior Caudate	brain
3	chr5:36436000-36441000	Weak transcription	Placenta	Placenta
4	chr5:36436600-36440000	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
5	chr5:36436800-36438800	Weak transcription	Hela-S3	cervix
6	chr5:36436800-36439000	Weak transcription	Brain Substantia Nigra	brain
7	chr5:36438000-36439200	Enhancers	Ganglion Eminence derived primary cultured neurospheres	brain
8	chr5:36438400-36439400	Enhancers	Cortex derived primary cultured neurospheres	brain
9	chr5:36438400-36439800	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
10	chr5:36438600-36439200	Enhancers	Brain Cingulate Gyrus	brain
11	chr5:36438600-36440400	Enhancers	K562	blood
12	chr5:36438600-36443000	Enhancers	Brain Hippocampus Middle	brain

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