Variant report

No.	Distal block	Cell Line	Cell type
1	chr5:40857647..40860536-chr5:40876647..40878892,2	K562	blood:
2	chr5:40828188..40830932-chr5:40857646..40860202,2	MCF-7	breast:
3	chr5:40847291..40849626-chr5:40854457..40858364,3	K562	blood:
4	chr5:40853432..40855800-chr5:40856837..40858853,2	K562	blood:
5	chr5:40858083..40859601-chr5:40868438..40871076,2	K562	blood:

rSNPs within LD-proxies of this variant (count:26)

rs_ID	r²[population]
rs1078376	1.00[ASN][1000 genomes]
rs11739984	0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11741864	0.90[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11742894	0.89[EUR][1000 genomes]
rs12153063	0.90[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12187430	1.00[ASN][1000 genomes]
rs1376179	1.00[ASN][1000 genomes]
rs34153616	0.84[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs56095030	1.00[ASN][1000 genomes]
rs60001990	1.00[ASN][1000 genomes]
rs60714178	1.00[ASN][1000 genomes]
rs62357602	0.84[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62357609	0.84[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62357613	0.84[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62357614	0.84[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62357615	0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62357644	0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62357645	0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62357646	0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62357647	0.90[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62358578	0.89[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73088577	1.00[ASN][1000 genomes]
rs73750214	1.00[ASN][1000 genomes]
rs73750215	1.00[ASN][1000 genomes]
rs73750216	1.00[ASN][1000 genomes]
rs73750218	1.00[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv880438	chr5:40753877-40900717	Strong transcription Enhancers Weak transcription Transcr. at gene 5' and 3' Flanking Active TSS Genic enhancers Active TSS ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	160 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:5 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:40852800-40865200	Weak transcription	Pancreas	Pancrea
2	chr5:40854600-40862600	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
3	chr5:40856000-40858800	Weak transcription	Lung	lung
4	chr5:40856200-40871400	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
5	chr5:40856400-40860200	Weak transcription	Primary neutrophils fromperipheralblood	blood

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