Variant report

Variant rs62389357
Chromosome Location chr6:29855902-29855903
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:122 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:29854400-29856600 Active TSS Fetal Intestine Large intestine
2 chr6:29854600-29856200 Active TSS Fetal Intestine Small intestine
3 chr6:29854600-29856600 Active TSS Foreskin Keratinocyte Primary Cells skin02 Skin
4 chr6:29854600-29856600 Active TSS Brain Dorsolateral Prefrontal Cortex brain
5 chr6:29854600-29856600 Active TSS Colonic Mucosa Colon
6 chr6:29854600-29857000 Active TSS Duodenum Smooth Muscle Duodenum
7 chr6:29854600-29857200 Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
8 chr6:29854800-29856000 Flanking Active TSS Primary T helper cells PMA-I stimulated --
9 chr6:29854800-29856600 Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
10 chr6:29854800-29856600 Active TSS Breast Myoepithelial Primary Cells Breast
11 chr6:29854800-29856600 Active TSS Aorta Aorta
12 chr6:29854800-29856800 Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
13 chr6:29854800-29857000 Active TSS Liver Liver
14 chr6:29854800-29857000 Active TSS Rectal Smooth Muscle rectum
15 chr6:29855000-29856000 Flanking Bivalent TSS/Enh Foreskin Fibroblast Primary Cells skin01 Skin
16 chr6:29855000-29856000 Bivalent/Poised TSS HSMM muscle
17 chr6:29855000-29856200 Active TSS Foreskin Fibroblast Primary Cells skin02 Skin
18 chr6:29855000-29856200 Active TSS Esophagus oesophagus
19 chr6:29855000-29856200 Bivalent/Poised TSS Fetal Stomach stomach
20 chr6:29855000-29856200 Active TSS Pancreas Pancrea
21 chr6:29855000-29856200 Active TSS A549 lung
22 chr6:29855000-29856400 Bivalent/Poised TSS ES-I3 Cell Line embryonic stem cell
23 chr6:29855000-29856400 Active TSS Placenta Placenta
24 chr6:29855000-29856400 Bivalent/Poised TSS Fetal Thymus thymus
25 chr6:29855000-29856400 Active TSS Left Ventricle heart
26 chr6:29855000-29856400 Active TSS Psoas Muscle Psoas
27 chr6:29855000-29856400 Active TSS Right Ventricle heart
28 chr6:29855000-29856400 Active TSS Small Intestine intestine
29 chr6:29855000-29856600 Bivalent/Poised TSS HUES48 Cell Line embryonic stem cell
30 chr6:29855000-29856600 Bivalent/Poised TSS HUES6 Cell Line embryonic stem cell
31 chr6:29855000-29856600 Bivalent/Poised TSS HUES64 Cell Line embryonic stem cell
32 chr6:29855000-29856600 Bivalent/Poised TSS iPS-15b Cell Line embryonic stem cell
33 chr6:29855000-29856600 Active TSS Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
34 chr6:29855000-29856600 Active TSS Primary T cells from cord blood blood
35 chr6:29855000-29856600 Active TSS Brain Angular Gyrus brain
36 chr6:29855000-29856600 Active TSS Brain Hippocampus Middle brain
37 chr6:29855000-29856600 Active TSS Colon Smooth Muscle Colon
38 chr6:29855000-29856600 Bivalent/Poised TSS Thymus Thymus
39 chr6:29855000-29856600 Bivalent/Poised TSS HSMMtube muscle
40 chr6:29855000-29856800 Bivalent/Poised TSS H9 Cell Line embryonic stem cell
41 chr6:29855000-29856800 Bivalent/Poised TSS iPS-18 Cell Line embryonic stem cell
42 chr6:29855000-29856800 Bivalent/Poised TSS iPS-20b Cell Line embryonic stem cell
43 chr6:29855000-29856800 Active TSS Lung lung
44 chr6:29855000-29856800 Active TSS Ovary ovary
45 chr6:29855000-29856800 Active TSS Right Atrium heart
46 chr6:29855000-29856800 Active TSS Dnd41 blood
47 chr6:29855000-29856800 Active TSS Osteobl bone
48 chr6:29855000-29857000 Active TSS Primary T killer memory cells from peripheral blood blood
49 chr6:29855000-29857000 Active TSS Brain Cingulate Gyrus brain
50 chr6:29855200-29856000 Bivalent/Poised TSS Cortex derived primary cultured neurospheres brain

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