Variant report

Variant	rs62401223
Chromosome Location	chr6:44468485-44468486
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 5 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:5)

rs_ID	r²[population]
rs1322668	0.83[EUR][1000 genomes]
rs17390094	0.92[AMR][1000 genomes];0.90[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs58178393	1.00[AFR][1000 genomes];0.89[AMR][1000 genomes];0.92[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs58482754	0.83[AFR][1000 genomes];0.94[AMR][1000 genomes]
rs72869666	0.83[AFR][1000 genomes];0.82[AMR][1000 genomes]

No data

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:44462000-44479200	Weak transcription	ES-I3 Cell Line	embryonic stem cell
2	chr6:44463200-44470800	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
3	chr6:44463400-44468800	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
4	chr6:44467600-44479200	Weak transcription	H9 Cell Line	embryonic stem cell

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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