Variant report

Variant	rs72869666
Chromosome Location	chr6:44463270-44463271
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr6:44458619..44460502-chr6:44462378..44464098,2	K562	blood:
2	chr6:44456674..44458437-chr6:44462102..44463883,2	MCF-7	breast:

rs_ID	r²[population]
rs58178393	0.83[AFR][1000 genomes];0.93[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs58482754	1.00[AFR][1000 genomes];0.81[AMR][1000 genomes]
rs62401219	0.81[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs62401223	0.83[AFR][1000 genomes];0.82[AMR][1000 genomes]

Chromatin state (count:26 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:44444000-44465800	Weak transcription	Right Atrium	heart
2	chr6:44458000-44464400	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
3	chr6:44458200-44463600	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
4	chr6:44459400-44464600	Weak transcription	Colon Smooth Muscle	Colon
5	chr6:44460200-44463400	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
6	chr6:44460800-44463600	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
7	chr6:44461000-44463400	Enhancers	NH-A	brain
8	chr6:44461000-44463400	Enhancers	Osteobl	bone
9	chr6:44461000-44463600	Enhancers	HMEC	breast
10	chr6:44461200-44463400	Enhancers	Foreskin Fibroblast Primary Cells skin02	Skin
11	chr6:44461200-44464800	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
12	chr6:44462000-44479200	Weak transcription	ES-I3 Cell Line	embryonic stem cell
13	chr6:44462200-44463600	Enhancers	Placenta	Placenta
14	chr6:44462400-44464200	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
15	chr6:44462800-44463400	Enhancers	H1 Cell Line	embryonic stem cell
16	chr6:44462800-44463400	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
17	chr6:44462800-44463400	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
18	chr6:44462800-44463600	Enhancers	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
19	chr6:44462800-44463600	Bivalent Enhancer	Fetal Muscle Trunk	muscle
20	chr6:44462800-44463600	Enhancers	Spleen	Spleen
21	chr6:44463000-44463600	Enhancers	Ganglion Eminence derived primary cultured neurospheres	brain
22	chr6:44463000-44464200	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
23	chr6:44463200-44463600	Enhancers	iPS DF 19.11 Cell Line	embryonic stem cell
24	chr6:44463200-44464400	Weak transcription	Muscle Satellite Cultured Cells	--
25	chr6:44463200-44464400	Weak transcription	NHDF-Ad	bronchial
26	chr6:44463200-44470800	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast

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