Variant report
| Variant | rs62412658 |
|---|---|
| Chromosome Location | chr6:54740216-54740217 |
| allele | C/T |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr6:54727200-54748800 | Weak transcription | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |
| 2 | chr6:54727400-54740400 | Weak transcription | Rectal Mucosa Donor 31 | rectum |
| 3 | chr6:54727400-54743800 | Weak transcription | Pancreas | Pancrea |
| 4 | chr6:54730400-54743800 | Weak transcription | ES-I3 Cell Line | embryonic stem cell |
| 5 | chr6:54734600-54741800 | Weak transcription | Placenta Amnion | Placenta Amnion |
| 6 | chr6:54736800-54741800 | Weak transcription | H1 BMP4 Derived Mesendoderm Cultured Cells | ES cell derived |
| 7 | chr6:54737200-54742200 | Enhancers | HMEC | breast |
| 8 | chr6:54737200-54746400 | Enhancers | Hela-S3 | cervix |
| 9 | chr6:54737600-54755800 | Weak transcription | Breast Myoepithelial Primary Cells | Breast |
| 10 | chr6:54737800-54740800 | Enhancers | NHEK | skin |
| 11 | chr6:54739200-54741400 | Enhancers | Foreskin Keratinocyte Primary Cells skin03 | Skin |
| 12 | chr6:54739400-54741600 | Weak transcription | hESC Derived CD184+ Endoderm Cultured Cells | ES cell derived |
| 13 | chr6:54739400-54742400 | Weak transcription | Pancreatic Islets | Pancreatic Islet |
| 14 | chr6:54739400-54742600 | Weak transcription | Stomach Mucosa | stomach |
| 15 | chr6:54739800-54742000 | Enhancers | Foreskin Keratinocyte Primary Cells skin02 | Skin |
| 16 | chr6:54739800-54763000 | Weak transcription | Small Intestine | intestine |
| 17 | chr6:54740000-54741800 | Enhancers | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
| 18 | chr6:54740000-54742400 | Weak transcription | Fetal Intestine Small | intestine |
| 19 | chr6:54740200-54741800 | Weak transcription | Fetal Intestine Large | intestine |
| 20 | chr6:54740200-54742000 | Weak transcription | Duodenum Mucosa | Duodenum |
