The 2.0 version of rSNPBase

Variant report

Variant rs62426092
Chromosome Location chr6:149673856-149673857
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:95 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:149641200-149681400 Weak transcription Fetal Stomach stomach
2 chr6:149649400-149689400 Weak transcription Fetal Brain Female brain
3 chr6:149654000-149674200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
4 chr6:149656800-149681400 Weak transcription Psoas Muscle Psoas
5 chr6:149656800-149682400 Weak transcription Lung lung
6 chr6:149656800-149694400 Weak transcription Placenta Placenta
7 chr6:149657800-149683800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
8 chr6:149657800-149691200 Weak transcription Rectal Mucosa Donor 29 rectum
9 chr6:149658000-149674000 Weak transcription H1 Cell Line embryonic stem cell
10 chr6:149658000-149679000 Weak transcription K562 blood
11 chr6:149658000-149680800 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
12 chr6:149658000-149681400 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
13 chr6:149658000-149695400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
14 chr6:149658200-149691000 Weak transcription NHDF-Ad bronchial
15 chr6:149658800-149674000 Weak transcription HepG2 liver
16 chr6:149658800-149692400 Weak transcription Fetal Kidney kidney
17 chr6:149659200-149685200 Weak transcription Ovary ovary
18 chr6:149659200-149691400 Weak transcription Fetal Muscle Trunk muscle
19 chr6:149659400-149679000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
20 chr6:149659600-149679200 Weak transcription NH-A brain
21 chr6:149659600-149684200 Weak transcription iPS-20b Cell Line embryonic stem cell
22 chr6:149660400-149682200 Weak transcription Fetal Muscle Leg muscle
23 chr6:149660400-149682400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
24 chr6:149660400-149685600 Weak transcription Pancreas Pancrea
25 chr6:149660400-149699200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
26 chr6:149661000-149674200 Weak transcription Left Ventricle heart
27 chr6:149662200-149694800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
28 chr6:149663000-149674000 Weak transcription Osteobl bone
29 chr6:149663400-149685400 Weak transcription Fetal Lung lung
30 chr6:149663600-149674200 Weak transcription Primary mononuclear cells fromperipheralblood Blood
31 chr6:149663800-149685400 Weak transcription Brain Anterior Caudate brain
32 chr6:149664000-149675200 Weak transcription Skeletal Muscle Male skeletal muscle
33 chr6:149664000-149682600 Weak transcription Cortex derived primary cultured neurospheres brain
34 chr6:149664000-149687400 Weak transcription HSMM muscle
35 chr6:149664000-149694400 Weak transcription Duodenum Mucosa Duodenum
36 chr6:149664600-149674000 Weak transcription Sigmoid Colon Sigmoid Colon
37 chr6:149664600-149681400 Weak transcription Primary hematopoietic stem cells short term culture blood
38 chr6:149664600-149687400 Weak transcription Right Ventricle heart
39 chr6:149665600-149680400 Weak transcription Brain Germinal Matrix brain
40 chr6:149665800-149680400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
41 chr6:149666000-149680400 Weak transcription Duodenum Smooth Muscle Duodenum
42 chr6:149666200-149685400 Weak transcription Brain Cingulate Gyrus brain
43 chr6:149666400-149683400 Weak transcription NHEK skin
44 chr6:149667400-149684200 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
45 chr6:149667400-149685600 Weak transcription Stomach Mucosa stomach
46 chr6:149667600-149674000 Weak transcription Primary B cells from cord blood blood
47 chr6:149667600-149678600 Weak transcription Primary monocytes fromperipheralblood blood
48 chr6:149667600-149679000 Weak transcription A549 lung
49 chr6:149667600-149691000 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
50 chr6:149668400-149682400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin

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Last update: Aug 31, 2015