Variant report

Variant	rs62427589
Chromosome Location	chr6:107211429-107211430
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 15 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:15)

rs_ID	r²[population]
rs17067716	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs56838214	1.00[EUR][1000 genomes]
rs58207285	1.00[EUR][1000 genomes]
rs62427582	1.00[EUR][1000 genomes]
rs62427583	1.00[EUR][1000 genomes]
rs62427584	1.00[EUR][1000 genomes]
rs62427585	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62427586	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62427587	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62427588	0.99[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs732290	1.00[EUR][1000 genomes]
rs7768266	1.00[EUR][1000 genomes]
rs7769052	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7772850	1.00[ASN][1000 genomes]
rs9486458	1.00[EUR][1000 genomes]

No data

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:107202000-107211800	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
2	chr6:107205800-107212000	Weak transcription	Liver	Liver
3	chr6:107211000-107213400	Enhancers	Pancreas	Pancrea
4	chr6:107211400-107212400	Enhancers	GM12878-XiMat	blood

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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