Variant report

Variant rs62501677
Chromosome Location chr8:53608823-53608824
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:66 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr8:53567400-53616000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
2 chr8:53595000-53610000 Weak transcription Fetal Stomach stomach
3 chr8:53595000-53612600 Weak transcription Fetal Lung lung
4 chr8:53595000-53615200 Weak transcription Thymus Thymus
5 chr8:53595000-53624400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
6 chr8:53595000-53625200 Weak transcription Stomach Smooth Muscle stomach
7 chr8:53598000-53624200 Weak transcription Primary mononuclear cells fromperipheralblood Blood
8 chr8:53601600-53624200 Weak transcription Cortex derived primary cultured neurospheres brain
9 chr8:53602600-53609800 Enhancers Primary T helper cells fromperipheralblood blood
10 chr8:53602600-53618200 Weak transcription Primary Natural Killer cells fromperipheralblood blood
11 chr8:53604000-53625200 Weak transcription Primary B cells from cord blood blood
12 chr8:53604400-53610600 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
13 chr8:53604600-53613200 Weak transcription Brain Germinal Matrix brain
14 chr8:53604600-53615600 Weak transcription Primary T cells from cord blood blood
15 chr8:53604600-53622200 Weak transcription Brain Angular Gyrus brain
16 chr8:53604800-53615600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
17 chr8:53605200-53609400 Enhancers Primary T helper naive cells fromperipheralblood blood
18 chr8:53606200-53609600 Enhancers Liver Liver
19 chr8:53606200-53609600 Enhancers Left Ventricle heart
20 chr8:53606600-53610200 Enhancers Primary T helper naive cells from peripheral blood blood
21 chr8:53606800-53614600 Weak transcription Fetal Heart heart
22 chr8:53607000-53609800 Weak transcription Brain Anterior Caudate brain
23 chr8:53607000-53613800 Weak transcription Esophagus oesophagus
24 chr8:53607000-53613800 Weak transcription Gastric stomach
25 chr8:53607000-53616000 Weak transcription Ovary ovary
26 chr8:53607000-53616800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
27 chr8:53607200-53609200 Enhancers Pancreatic Islets Pancreatic Islet
28 chr8:53607200-53610200 Enhancers Hela-S3 cervix
29 chr8:53607200-53615400 Weak transcription Adipose Nuclei Adipose
30 chr8:53607400-53611600 Weak transcription Primary T killer memory cells from peripheral blood blood
31 chr8:53607400-53613200 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
32 chr8:53607400-53615000 Weak transcription Primary T regulatory cells fromperipheralblood blood
33 chr8:53607400-53615400 Weak transcription Aorta Aorta
34 chr8:53607400-53620000 Weak transcription Primary B cells from peripheral blood blood
35 chr8:53607800-53609000 Enhancers Sigmoid Colon Sigmoid Colon
36 chr8:53608000-53609600 Enhancers Colon Smooth Muscle Colon
37 chr8:53608000-53615400 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
38 chr8:53608200-53609000 ZNF genes & repeats Fetal Intestine Small intestine
39 chr8:53608200-53620000 Weak transcription Brain Substantia Nigra brain
40 chr8:53608400-53612800 Weak transcription Small Intestine intestine
41 chr8:53608400-53613400 Weak transcription Skeletal Muscle Male skeletal muscle
42 chr8:53608400-53613400 Weak transcription Skeletal Muscle Female skeletal muscle
43 chr8:53608400-53613800 Weak transcription Primary T helper 17 cells PMA-I stimulated --
44 chr8:53608400-53615600 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
45 chr8:53608400-53615800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
46 chr8:53608400-53616400 Weak transcription Breast Myoepithelial Primary Cells Breast
47 chr8:53608400-53624000 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
48 chr8:53608600-53610200 Enhancers HepG2 liver
49 chr8:53608600-53612000 Weak transcription HSMM muscle
50 chr8:53608600-53612800 Weak transcription Pancreas Pancrea

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