Variant report

Variant	rs62523321
Chromosome Location	chr8:103695982-103695983
allele	A/G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:0)
CpG islands
(count:0)
Chromatin interactive
region (count:11)
LncRNA
region (count:0)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

No data

(count:11 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr8:103695957..103698904-chr8:103817763..103821166,3	K562	blood:
2	chr8:103694162..103696832-chr8:103715442..103717572,2	MCF-7	breast:
3	chr8:103694664..103696748-chr8:103757615..103759770,2	MCF-7	breast:
4	chr8:103668018..103669942-chr8:103695830..103697855,2	MCF-7	breast:
5	chr8:103690164..103700776-chr8:103817633..103824078,16	MCF-7	breast:
6	chr8:103667677..103669281-chr8:103694973..103697560,2	K562	blood:
7	chr8:103599978..103602949-chr8:103693848..103696223,2	K562	blood:
8	chr8:103690697..103697091-chr8:103702860..103706318,8	MCF-7	breast:
9	chr8:103695038..103697109-chr8:103734957..103736636,2	MCF-7	breast:
10	chr8:103695977..103697957-chr8:103799745..103801613,2	MCF-7	breast:
11	chr8:103693701..103696201-chr8:103709941..103712706,2	MCF-7	breast:

No data

Variant related genes	Relation type
ENSG00000253669	Chromatin interaction
ENSG00000155090	Chromatin interaction

Extended variants
information (count: 5 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:2)

rs_ID	r²[population]
rs16869818	1.00[EUR][1000 genomes]
rs7816857	1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv33118	chr8:103358567-104068172	Enhancers Weak transcription Flanking Active TSS Active TSS Strong transcription Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent Enhancer Genic enhancers Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	145 gene(s)	inside rSNPs	diseases
2	nsv1026755	chr8:103676970-103728556	Enhancers Flanking Active TSS Weak transcription Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
3	nsv1018625	chr8:103676970-103729197	Weak transcription Enhancers Flanking Active TSS Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:23 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:103675400-103698200	Weak transcription	Osteobl	bone
2	chr8:103679800-103706400	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
3	chr8:103688800-103697800	Weak transcription	Lung	lung
4	chr8:103690200-103704800	Weak transcription	A549	lung
5	chr8:103692200-103697600	Weak transcription	Fetal Intestine Small	intestine
6	chr8:103693200-103696000	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
7	chr8:103693200-103697000	Weak transcription	Fetal Muscle Trunk	muscle
8	chr8:103693600-103697200	Weak transcription	Liver	Liver
9	chr8:103693800-103697400	Weak transcription	Spleen	Spleen
10	chr8:103693800-103697800	Weak transcription	Right Atrium	heart
11	chr8:103694000-103697800	Weak transcription	HSMMtube	muscle
12	chr8:103694200-103697800	Weak transcription	Left Ventricle	heart
13	chr8:103694400-103696000	Weak transcription	Placenta	Placenta
14	chr8:103694400-103697400	Weak transcription	Psoas Muscle	Psoas
15	chr8:103695000-103697200	Weak transcription	Fetal Muscle Leg	muscle
16	chr8:103695000-103699200	Enhancers	Breast Myoepithelial Primary Cells	Breast
17	chr8:103695200-103696000	Weak transcription	Fetal Thymus	thymus
18	chr8:103695200-103697200	Weak transcription	Skeletal Muscle Male	skeletal muscle
19	chr8:103695200-103697200	Weak transcription	Skeletal Muscle Female	skeletal muscle
20	chr8:103695400-103696000	Enhancers	HMEC	breast
21	chr8:103695600-103696000	Enhancers	NHEK	skin
22	chr8:103695800-103696000	Enhancers	Esophagus	oesophagus
23	chr8:103695800-103696200	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin

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