The 2.0 version of rSNPBase

Variant report

Variant rs62559062
Chromosome Location chr9:93575105-93575106
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:40 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr9:93565000-93609000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
2 chr9:93565400-93577000 Weak transcription Colonic Mucosa Colon
3 chr9:93567800-93584800 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
4 chr9:93567800-93584800 Weak transcription Fetal Intestine Large intestine
5 chr9:93567800-93597400 Weak transcription Gastric stomach
6 chr9:93568400-93576600 Weak transcription Rectal Mucosa Donor 29 rectum
7 chr9:93571000-93575200 Strong transcription Fetal Intestine Small intestine
8 chr9:93571200-93576200 Genic enhancers Primary monocytes fromperipheralblood blood
9 chr9:93571200-93576600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
10 chr9:93571400-93576600 Weak transcription Small Intestine intestine
11 chr9:93571400-93576800 Weak transcription Primary T cells from cord blood blood
12 chr9:93571600-93575800 Genic enhancers Primary hematopoietic stem cells short term culture blood
13 chr9:93571800-93577600 Weak transcription Fetal Kidney kidney
14 chr9:93572000-93576000 Genic enhancers Monocytes-CD14+_RO01746 blood
15 chr9:93572600-93575400 Weak transcription Sigmoid Colon Sigmoid Colon
16 chr9:93572600-93591000 Weak transcription Lung lung
17 chr9:93572800-93576800 Weak transcription Esophagus oesophagus
18 chr9:93572800-93584800 Weak transcription Duodenum Mucosa Duodenum
19 chr9:93573000-93575400 Weak transcription Fetal Stomach stomach
20 chr9:93573200-93575800 Weak transcription K562 blood
21 chr9:93573200-93576600 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
22 chr9:93573200-93589600 Weak transcription Rectal Mucosa Donor 31 rectum
23 chr9:93573400-93577200 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
24 chr9:93573600-93577000 Enhancers Primary B cells from peripheral blood blood
25 chr9:93574000-93577400 Enhancers Primary hematopoietic stem cells blood
26 chr9:93574200-93577000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
27 chr9:93574200-93577600 Weak transcription HMEC breast
28 chr9:93574400-93575400 Genic enhancers Primary B cells from cord blood blood
29 chr9:93574600-93575800 Genic enhancers Primary neutrophils fromperipheralblood blood
30 chr9:93574600-93576000 Enhancers Spleen Spleen
31 chr9:93574600-93578000 Enhancers Foreskin Melanocyte Primary Cells skin01 Skin
32 chr9:93574600-93578600 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
33 chr9:93574600-93578800 Enhancers Primary Natural Killer cells fromperipheralblood blood
34 chr9:93574800-93576600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
35 chr9:93574800-93577000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
36 chr9:93574800-93577400 Enhancers GM12878-XiMat blood
37 chr9:93574800-93580200 Weak transcription Pancreas Pancrea
38 chr9:93575000-93575600 Weak transcription Thymus Thymus
39 chr9:93575000-93575800 Weak transcription Fetal Thymus thymus
40 chr9:93575000-93580600 Weak transcription Stomach Mucosa stomach

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Last update: Aug 31, 2015