Variant report

Variant	rs62560447
Chromosome Location	chr9:85843721-85843722
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 10 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:10)

rs_ID	r²[population]
rs12685462	0.83[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs17086102	0.85[AMR][1000 genomes];0.89[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs62560410	0.83[ASN][1000 genomes]
rs62560412	0.81[AMR][1000 genomes]
rs62560415	0.81[AMR][1000 genomes]
rs62560416	0.81[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs62560445	0.93[AMR][1000 genomes];0.90[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62560449	0.90[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62560450	0.85[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs72743011	0.81[AMR][1000 genomes];0.81[EUR][1000 genomes];0.87[ASN][1000 genomes]

No data

Chromatin state (count:8 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr9:85843400-85843800	Active TSS	H9 Cell Line	embryonic stem cell
2	chr9:85843400-85843800	Active TSS	HUES64 Cell Line	embryonic stem cell
3	chr9:85843400-85844000	Active TSS	ES-I3 Cell Line	embryonic stem cell
4	chr9:85843400-85844000	Active TSS	H1 Cell Line	embryonic stem cell
5	chr9:85843400-85844000	Active TSS	HUES6 Cell Line	embryonic stem cell
6	chr9:85843400-85844000	Active TSS	iPS-15b Cell Line	embryonic stem cell
7	chr9:85843400-85844000	Active TSS	iPS-18 Cell Line	embryonic stem cell
8	chr9:85843600-85844000	Active TSS	ES-WA7 Cell Line	embryonic stem cell

Quick Search:

Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

what's new

Quick links