Variant report

Variant	rs62560449
Chromosome Location	chr9:85847931-85847932
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 12 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:12)

rs_ID	r²[population]
rs1048228	0.83[AMR][1000 genomes]
rs12685462	0.87[AMR][1000 genomes];0.88[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs17086102	0.95[AMR][1000 genomes];0.95[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs62560410	0.80[AMR][1000 genomes];0.83[ASN][1000 genomes]
rs62560412	0.86[AMR][1000 genomes];0.80[EUR][1000 genomes]
rs62560415	0.86[AMR][1000 genomes];0.80[EUR][1000 genomes]
rs62560416	0.84[AMR][1000 genomes];0.87[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs62560445	0.97[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62560447	0.90[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62560450	0.87[AMR][1000 genomes];0.91[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs72743011	0.86[AMR][1000 genomes];0.87[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs7874181	0.83[AMR][1000 genomes]

No data

Chromatin state (count:13 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr9:85844200-85850600	Weak transcription	iPS-15b Cell Line	embryonic stem cell
2	chr9:85846400-85854000	Weak transcription	Pancreas	Pancrea
3	chr9:85846600-85854000	Weak transcription	Fetal Muscle Leg	muscle
4	chr9:85846600-85854000	Weak transcription	Left Ventricle	heart
5	chr9:85846600-85854000	Weak transcription	Psoas Muscle	Psoas
6	chr9:85846600-85854000	Weak transcription	Right Atrium	heart
7	chr9:85846800-85848400	Weak transcription	Fetal Heart	heart
8	chr9:85846800-85854000	Weak transcription	Skeletal Muscle Male	skeletal muscle
9	chr9:85847200-85865400	Weak transcription	Ovary	ovary
10	chr9:85847600-85848400	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
11	chr9:85847800-85848000	Enhancers	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
12	chr9:85847800-85848000	Enhancers	iPS DF 6.9 Cell Line	embryonic stem cell
13	chr9:85847800-85848400	Enhancers	Cortex derived primary cultured neurospheres	brain

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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