Variant report
| Variant | rs6425231 |
|---|---|
| Chromosome Location | chr1:173389184-173389185 |
| allele | A/T |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr1:173348600-173389400 | Weak transcription | Right Ventricle | heart |
| 2 | chr1:173363800-173389400 | Weak transcription | Fetal Lung | lung |
| 3 | chr1:173370800-173389200 | Weak transcription | ES-I3 Cell Line | embryonic stem cell |
| 4 | chr1:173370800-173389200 | Weak transcription | iPS-15b Cell Line | embryonic stem cell |
| 5 | chr1:173370800-173389400 | Weak transcription | H1 Cell Line | embryonic stem cell |
| 6 | chr1:173370800-173389400 | Weak transcription | H9 Cell Line | embryonic stem cell |
| 7 | chr1:173370800-173389400 | Weak transcription | Aorta | Aorta |
| 8 | chr1:173372000-173398600 | Weak transcription | Brain Substantia Nigra | brain |
| 9 | chr1:173375200-173398600 | Weak transcription | Esophagus | oesophagus |
| 10 | chr1:173376000-173389400 | Weak transcription | Brain Cingulate Gyrus | brain |
| 11 | chr1:173376200-173389400 | Weak transcription | Brain Anterior Caudate | brain |
| 12 | chr1:173376200-173429000 | Weak transcription | Gastric | stomach |
| 13 | chr1:173376400-173389200 | Weak transcription | Liver | Liver |
| 14 | chr1:173376400-173389200 | Weak transcription | A549 | lung |
| 15 | chr1:173376400-173389400 | Weak transcription | HUES64 Cell Line | embryonic stem cell |
| 16 | chr1:173376400-173389400 | Weak transcription | Brain Inferior Temporal Lobe | brain |
| 17 | chr1:173376400-173389400 | Weak transcription | Rectal Smooth Muscle | rectum |
| 18 | chr1:173376400-173400800 | Weak transcription | iPS DF 19.11 Cell Line | embryonic stem cell |
| 19 | chr1:173376600-173389200 | Weak transcription | Rectal Mucosa Donor 31 | rectum |
| 20 | chr1:173376600-173389400 | Weak transcription | Colonic Mucosa | Colon |
| 21 | chr1:173376600-173389600 | Enhancers | Primary B cells from peripheral blood | blood |
| 22 | chr1:173376600-173392600 | Weak transcription | Foreskin Keratinocyte Primary Cells skin03 | Skin |
| 23 | chr1:173378400-173398400 | Weak transcription | Brain Angular Gyrus | brain |
| 24 | chr1:173379000-173398400 | Weak transcription | Breast Myoepithelial Primary Cells | Breast |
| 25 | chr1:173379200-173393200 | Weak transcription | Foreskin Keratinocyte Primary Cells skin02 | Skin |
| 26 | chr1:173379600-173389200 | Weak transcription | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
| 27 | chr1:173380000-173389400 | Weak transcription | Primary T killer memory cells from peripheral blood | blood |
| 28 | chr1:173380000-173389600 | Enhancers | Primary B cells from cord blood | blood |
| 29 | chr1:173380200-173389400 | Weak transcription | Duodenum Smooth Muscle | Duodenum |
| 30 | chr1:173380200-173391200 | Weak transcription | HUES6 Cell Line | embryonic stem cell |
| 31 | chr1:173380200-173398400 | Weak transcription | Brain Hippocampus Middle | brain |
| 32 | chr1:173380200-173398600 | Weak transcription | Primary T cells effector/memory enriched fromperipheralblood | blood |
| 33 | chr1:173380200-173398600 | Weak transcription | Psoas Muscle | Psoas |
| 34 | chr1:173380400-173389200 | Weak transcription | Primary T helper memory cells from peripheral blood 1 | blood |
| 35 | chr1:173380400-173389200 | Weak transcription | Primary T helper cells PMA-I stimulated | -- |
| 36 | chr1:173380400-173389200 | Weak transcription | Primary T killer naive cells fromperipheralblood | blood |
| 37 | chr1:173380400-173389400 | Weak transcription | Primary T helper memory cells from peripheral blood 2 | blood |
| 38 | chr1:173380400-173389400 | Weak transcription | Brain Dorsolateral Prefrontal Cortex | brain |
| 39 | chr1:173380400-173389400 | Weak transcription | Pancreas | Pancrea |
| 40 | chr1:173380400-173392600 | Weak transcription | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |
| 41 | chr1:173380400-173398400 | Weak transcription | Foreskin Fibroblast Primary Cells skin02 | Skin |
| 42 | chr1:173380400-173398600 | Weak transcription | Thymus | Thymus |
| 43 | chr1:173380400-173398800 | Weak transcription | Primary mononuclear cells fromperipheralblood | Blood |
| 44 | chr1:173381600-173389400 | Weak transcription | IMR90 fetal lung fibroblasts Cell Line | lung |
| 45 | chr1:173381800-173389400 | Weak transcription | Muscle Satellite Cultured Cells | -- |
| 46 | chr1:173383000-173389400 | Weak transcription | Small Intestine | intestine |
| 47 | chr1:173383000-173390600 | Weak transcription | Ovary | ovary |
| 48 | chr1:173383000-173398600 | Weak transcription | Foreskin Melanocyte Primary Cells skin01 | Skin |
| 49 | chr1:173383800-173389200 | Weak transcription | Skeletal Muscle Male | skeletal muscle |
| 50 | chr1:173384000-173389400 | Weak transcription | Right Atrium | heart |
