The 2.0 version of rSNPBase

Variant report

Variant rs6426577
Chromosome Location chr1:227355918-227355919
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:60 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:227287400-227360800 Weak transcription Psoas Muscle Psoas
2 chr1:227288400-227398000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
3 chr1:227300000-227379800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
4 chr1:227317000-227374200 Weak transcription HepG2 liver
5 chr1:227329600-227358400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
6 chr1:227329600-227380000 Weak transcription Aorta Aorta
7 chr1:227331600-227358400 Weak transcription Brain Cingulate Gyrus brain
8 chr1:227333400-227358400 Weak transcription Osteobl bone
9 chr1:227333400-227359000 Weak transcription Skeletal Muscle Male skeletal muscle
10 chr1:227333400-227381000 Weak transcription Rectal Mucosa Donor 29 rectum
11 chr1:227333400-227405600 Weak transcription Adipose Nuclei Adipose
12 chr1:227334800-227371800 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
13 chr1:227343200-227400400 Weak transcription A549 lung
14 chr1:227343600-227358400 Weak transcription Colon Smooth Muscle Colon
15 chr1:227346800-227357400 Weak transcription Brain Substantia Nigra brain
16 chr1:227346800-227357800 Weak transcription NHDF-Ad bronchial
17 chr1:227346800-227358000 Weak transcription Muscle Satellite Cultured Cells --
18 chr1:227346800-227358200 Weak transcription Right Ventricle heart
19 chr1:227346800-227358400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
20 chr1:227346800-227366600 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
21 chr1:227346800-227379800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
22 chr1:227346800-227403800 Weak transcription Duodenum Smooth Muscle Duodenum
23 chr1:227346800-227405800 Weak transcription Rectal Mucosa Donor 31 rectum
24 chr1:227346800-227406800 Weak transcription Fetal Kidney kidney
25 chr1:227347200-227378000 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
26 chr1:227347800-227357400 Weak transcription Left Ventricle heart
27 chr1:227347800-227363600 Weak transcription Fetal Stomach stomach
28 chr1:227347800-227385800 Weak transcription Fetal Intestine Small intestine
29 chr1:227347800-227390400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
30 chr1:227348000-227358200 Weak transcription Brain Hippocampus Middle brain
31 chr1:227348000-227358400 Weak transcription Brain Inferior Temporal Lobe brain
32 chr1:227348000-227361000 Weak transcription NHEK skin
33 chr1:227348200-227357800 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
34 chr1:227348200-227358000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
35 chr1:227348200-227358000 Weak transcription HSMM muscle
36 chr1:227348200-227358200 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
37 chr1:227348200-227358200 Weak transcription Brain Angular Gyrus brain
38 chr1:227348200-227361000 Weak transcription HSMMtube muscle
39 chr1:227348200-227367600 Weak transcription Cortex derived primary cultured neurospheres brain
40 chr1:227348200-227370200 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
41 chr1:227348200-227370400 Weak transcription Breast Myoepithelial Primary Cells Breast
42 chr1:227348200-227371400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
43 chr1:227348200-227376400 Weak transcription Fetal Lung lung
44 chr1:227348200-227377800 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
45 chr1:227348200-227377800 Weak transcription HUVEC blood vessel
46 chr1:227348200-227379800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
47 chr1:227348200-227398000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
48 chr1:227348200-227398400 Weak transcription Fetal Adrenal Gland Adrenal Gland
49 chr1:227348200-227401600 Weak transcription Sigmoid Colon Sigmoid Colon
50 chr1:227348200-227408400 Weak transcription Fetal Muscle Trunk muscle

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Last update: Aug 31, 2015