The 2.0 version of rSNPBase

Variant report

Variant rs6438666
Chromosome Location chr3:121515620-121515621
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:115 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:121486200-121526600 Weak transcription Stomach Mucosa stomach
2 chr3:121486800-121532200 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
3 chr3:121487800-121516400 Strong transcription Primary hematopoietic stem cells short term culture blood
4 chr3:121487800-121519000 Strong transcription Monocytes-CD14+_RO01746 blood
5 chr3:121488600-121517800 Strong transcription Primary monocytes fromperipheralblood blood
6 chr3:121489800-121529800 Weak transcription Aorta Aorta
7 chr3:121490000-121529800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
8 chr3:121490000-121529800 Weak transcription Pancreas Pancrea
9 chr3:121491600-121552600 Weak transcription NHLF lung
10 chr3:121494200-121544200 Weak transcription Fetal Brain Male brain
11 chr3:121494400-121518800 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
12 chr3:121494400-121530000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
13 chr3:121494800-121516000 Strong transcription Breast Myoepithelial Primary Cells Breast
14 chr3:121500200-121515800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
15 chr3:121500200-121524200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
16 chr3:121500200-121541400 Weak transcription ES-I3 Cell Line embryonic stem cell
17 chr3:121500600-121528200 Weak transcription Brain Angular Gyrus brain
18 chr3:121501200-121524000 Weak transcription Primary T killer memory cells from peripheral blood blood
19 chr3:121501400-121529800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
20 chr3:121504800-121524000 Weak transcription Hela-S3 cervix
21 chr3:121505000-121521400 Weak transcription Fetal Intestine Small intestine
22 chr3:121505800-121523600 Weak transcription Brain Cingulate Gyrus brain
23 chr3:121506400-121529800 Weak transcription Fetal Stomach stomach
24 chr3:121507000-121529800 Weak transcription Colonic Mucosa Colon
25 chr3:121507000-121545400 Weak transcription Fetal Heart heart
26 chr3:121507200-121536000 Weak transcription H9 Cell Line embryonic stem cell
27 chr3:121508000-121523600 Weak transcription Fetal Brain Female brain
28 chr3:121508000-121525000 Weak transcription Thymus Thymus
29 chr3:121508000-121529800 Weak transcription Rectal Smooth Muscle rectum
30 chr3:121508200-121535800 Weak transcription Psoas Muscle Psoas
31 chr3:121508400-121518000 Weak transcription Cortex derived primary cultured neurospheres brain
32 chr3:121508400-121523200 Weak transcription Primary T helper 17 cells PMA-I stimulated --
33 chr3:121508400-121524400 Weak transcription Left Ventricle heart
34 chr3:121508400-121524400 Weak transcription Lung lung
35 chr3:121508400-121529800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
36 chr3:121508400-121529800 Weak transcription Esophagus oesophagus
37 chr3:121508400-121536400 Weak transcription HUVEC blood vessel
38 chr3:121508600-121523400 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
39 chr3:121508600-121523400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
40 chr3:121508600-121523600 Weak transcription H1 Cell Line embryonic stem cell
41 chr3:121508600-121524800 Weak transcription Colon Smooth Muscle Colon
42 chr3:121508600-121525000 Weak transcription Brain Anterior Caudate brain
43 chr3:121508600-121529600 Weak transcription Brain Substantia Nigra brain
44 chr3:121508600-121529800 Weak transcription Primary neutrophils fromperipheralblood blood
45 chr3:121508600-121529800 Weak transcription Muscle Satellite Cultured Cells --
46 chr3:121508600-121529800 Weak transcription NHEK skin
47 chr3:121508600-121541400 Weak transcription Placenta Amnion Placenta Amnion
48 chr3:121508800-121523600 Weak transcription HMEC breast
49 chr3:121508800-121524400 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
50 chr3:121508800-121525200 Weak transcription Primary T killer naive cells fromperipheralblood blood

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Last update: Aug 31, 2015