Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr4:47072725..47074319-chr4:47086476..47088590,2	K562	blood:

rSNPs within LD-proxies of this variant (count:9)

rs_ID	r²[population]
rs10003525	1.00[CEU][hapmap];0.94[CHB][hapmap];0.89[JPT][hapmap];1.00[YRI][hapmap];0.96[AMR][1000 genomes];0.98[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs10027299	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs4396968	1.00[CEU][hapmap];0.80[TSI][hapmap]
rs4538456	0.80[AFR][1000 genomes];0.96[AMR][1000 genomes];0.98[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs4613538	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.87[GIH][hapmap];0.95[JPT][hapmap];1.00[MEX][hapmap];1.00[TSI][hapmap];0.95[YRI][hapmap];0.80[AFR][1000 genomes];0.96[AMR][1000 genomes];0.98[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs4694834	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.87[GIH][hapmap];1.00[JPT][hapmap];0.93[LWK][hapmap];1.00[MEX][hapmap];0.85[MKK][hapmap];1.00[TSI][hapmap];0.95[YRI][hapmap];0.88[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs6447533	0.85[ASN][1000 genomes]
rs7666148	0.92[AMR][1000 genomes];0.93[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs7676525	0.80[AFR][1000 genomes];0.99[AMR][1000 genomes];0.98[EUR][1000 genomes];0.98[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv537078	chr4:47059778-47137372	Weak transcription Enhancers Flanking Active TSS Bivalent Enhancer	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:20 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:47054600-47075600	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
2	chr4:47067600-47076800	Weak transcription	Brain Cingulate Gyrus	brain
3	chr4:47068200-47078000	Weak transcription	Brain Inferior Temporal Lobe	brain
4	chr4:47071800-47073600	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
5	chr4:47071800-47086600	Weak transcription	Fetal Lung	lung
6	chr4:47072600-47079200	Enhancers	Hela-S3	cervix
7	chr4:47073000-47074200	Enhancers	NH-A	brain
8	chr4:47073200-47073600	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
9	chr4:47073200-47074200	Enhancers	Muscle Satellite Cultured Cells	--
10	chr4:47073200-47074600	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
11	chr4:47073200-47074600	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
12	chr4:47073200-47074600	Enhancers	Osteobl	bone
13	chr4:47073200-47074800	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
14	chr4:47073200-47075800	Enhancers	HUVEC	blood vessel
15	chr4:47073400-47073600	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
16	chr4:47073400-47074400	Enhancers	NHEK	skin
17	chr4:47073400-47074600	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
18	chr4:47073400-47074600	Enhancers	Brain Anterior Caudate	brain
19	chr4:47073400-47074800	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
20	chr4:47073400-47076000	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin

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