Variant report

Variant rs6451302
Chromosome Location chr5:36596848-36596849
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:21 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:36591200-36606200 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
2 chr5:36591800-36597000 Weak transcription Brain Anterior Caudate brain
3 chr5:36591800-36597800 Weak transcription Cortex derived primary cultured neurospheres brain
4 chr5:36591800-36597800 Weak transcription Brain Hippocampus Middle brain
5 chr5:36591800-36597800 Weak transcription Brain Inferior Temporal Lobe brain
6 chr5:36591800-36598000 Weak transcription Brain Substantia Nigra brain
7 chr5:36592000-36597800 Weak transcription Brain Angular Gyrus brain
8 chr5:36592600-36598000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
9 chr5:36596000-36597600 Enhancers H9 Cell Line embryonic stem cell
10 chr5:36596200-36597000 Enhancers iPS DF 6.9 Cell Line embryonic stem cell
11 chr5:36596200-36597000 Enhancers ES-UCSF4 Cell Line embryonic stem cell
12 chr5:36596200-36598400 Enhancers H1 Cell Line embryonic stem cell
13 chr5:36596400-36597200 Enhancers ES-I3 Cell Line embryonic stem cell
14 chr5:36596600-36597000 Active TSS ES-WA7 Cell Line embryonic stem cell
15 chr5:36596600-36597000 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
16 chr5:36596600-36597000 Flanking Active TSS HUES48 Cell Line embryonic stem cell
17 chr5:36596600-36597000 Flanking Active TSS HUES64 Cell Line embryonic stem cell
18 chr5:36596600-36597000 Flanking Active TSS iPS-18 Cell Line embryonic stem cell
19 chr5:36596600-36597000 Flanking Active TSS iPS-20b Cell Line embryonic stem cell
20 chr5:36596800-36597200 Flanking Active TSS HUES6 Cell Line embryonic stem cell
21 chr5:36596800-36597200 Flanking Active TSS iPS-15b Cell Line embryonic stem cell

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