Variant report
| Variant | rs6458322 |
|---|---|
| Chromosome Location | chr6:12521349-12521350 |
| allele | A/G |
| Outlinks | Ensembl UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:0)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
| No data |
| No data |
| No data |
| No data |
| No data |
| No data |
| No data |
rSNPs within LD-proxies of this variant (count:48)
| rs_ID | r2[population] |
|---|---|
| rs10046276 | 1.00[EUR][1000 genomes] |
| rs11750980 | 1.00[EUR][1000 genomes] |
| rs11966877 | 1.00[EUR][1000 genomes] |
| rs12332919 | 1.00[EUR][1000 genomes] |
| rs1334306 | 1.00[EUR][1000 genomes] |
| rs1334307 | 1.00[EUR][1000 genomes] |
| rs2490446 | 1.00[EUR][1000 genomes] |
| rs2490448 | 1.00[EUR][1000 genomes] |
| rs2490450 | 1.00[EUR][1000 genomes] |
| rs2490451 | 1.00[EUR][1000 genomes] |
| rs2504866 | 1.00[EUR][1000 genomes] |
| rs2504889 | 1.00[EUR][1000 genomes] |
| rs2504893 | 1.00[EUR][1000 genomes] |
| rs2504896 | 1.00[EUR][1000 genomes] |
| rs2516229 | 1.00[EUR][1000 genomes] |
| rs2516230 | 1.00[EUR][1000 genomes] |
| rs2516236 | 1.00[TSI][hapmap];1.00[EUR][1000 genomes] |
| rs2516237 | 1.00[EUR][1000 genomes] |
| rs57317303 | 1.00[EUR][1000 genomes] |
| rs59901827 | 1.00[EUR][1000 genomes] |
| rs60493852 | 1.00[EUR][1000 genomes] |
| rs60501074 | 1.00[EUR][1000 genomes] |
| rs6900340 | 1.00[EUR][1000 genomes] |
| rs6916851 | 1.00[EUR][1000 genomes] |
| rs6928058 | 1.00[EUR][1000 genomes] |
| rs6933484 | 1.00[EUR][1000 genomes] |
| rs73356106 | 1.00[EUR][1000 genomes] |
| rs73356116 | 1.00[EUR][1000 genomes] |
| rs73356122 | 1.00[EUR][1000 genomes] |
| rs73356124 | 1.00[EUR][1000 genomes] |
| rs73369214 | 1.00[EUR][1000 genomes] |
| rs73722796 | 1.00[EUR][1000 genomes] |
| rs7738584 | 1.00[EUR][1000 genomes] |
| rs9462819 | 1.00[EUR][1000 genomes] |
| rs9462825 | 1.00[EUR][1000 genomes] |
| rs9462830 | 1.00[EUR][1000 genomes] |
| rs9462834 | 1.00[EUR][1000 genomes] |
| rs9471867 | 1.00[EUR][1000 genomes] |
| rs9471922 | 1.00[EUR][1000 genomes] |
| rs9471924 | 1.00[EUR][1000 genomes] |
| rs9472012 | 0.84[AFR][1000 genomes];1.00[EUR][1000 genomes] |
| rs9472013 | 0.84[AFR][1000 genomes];1.00[EUR][1000 genomes] |
| rs9472037 | 1.00[EUR][1000 genomes] |
| rs9472109 | 1.00[EUR][1000 genomes] |
| rs9472110 | 1.00[EUR][1000 genomes] |
| rs9472123 | 1.00[EUR][1000 genomes] |
| rs9472198 | 1.00[EUR][1000 genomes] |
| rs9717503 | 1.00[EUR][1000 genomes] |
| No data |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr6:12516600-12530200 | Weak transcription | H1 BMP4 Derived Mesendoderm Cultured Cells | ES cell derived |
