Variant report

Variant	rs6459428
Chromosome Location	chr6:15931055-15931056
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 12 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:12)

rs_ID	r²[population]
rs10214915	0.89[CEU][hapmap];0.81[EUR][1000 genomes]
rs10949321	0.82[EUR][1000 genomes]
rs1122664	0.89[CEU][hapmap];0.81[EUR][1000 genomes]
rs1269141	1.00[CEU][hapmap];0.95[CHB][hapmap];0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1810476	0.92[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs2105356	0.93[EUR][1000 genomes]
rs4712267	0.92[EUR][1000 genomes]
rs6932531	1.00[CEU][hapmap];1.00[CHB][hapmap];0.95[JPT][hapmap];0.98[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6939221	0.96[AFR][1000 genomes];0.99[AMR][1000 genomes];0.98[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs7745980	0.81[CEU][hapmap]
rs808366	0.83[CHB][hapmap];0.83[JPT][hapmap];0.95[AMR][1000 genomes];0.97[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs9765919	0.83[EUR][1000 genomes]

No data

Chromatin state (count:6 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:15928000-15936400	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
2	chr6:15930600-15931600	Enhancers	Breast Myoepithelial Primary Cells	Breast
3	chr6:15930800-15931600	ZNF genes & repeats	Primary monocytes fromperipheralblood	blood
4	chr6:15930800-15931800	ZNF genes & repeats	Placenta	Placenta
5	chr6:15931000-15931400	ZNF genes & repeats	Monocytes-CD14+_RO01746	blood
6	chr6:15931000-15931600	ZNF genes & repeats	Adipose Nuclei	Adipose

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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