Variant report

rSNPs within LD-proxies of this variant (count:21)

rs_ID	r²[population]
rs10215028	0.88[CEU][hapmap]
rs10243451	0.89[CHB][hapmap];0.94[JPT][hapmap]
rs10279461	0.88[CEU][hapmap];0.94[CHB][hapmap];1.00[JPT][hapmap];0.80[AMR][1000 genomes];0.91[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs1036140	0.88[CEU][hapmap]
rs10486037	0.88[CEU][hapmap];0.89[EUR][1000 genomes]
rs12532527	0.94[JPT][hapmap]
rs12532918	0.90[ASN][1000 genomes]
rs12535183	0.86[CHB][hapmap];0.94[JPT][hapmap]
rs12539016	0.89[ASN][1000 genomes]
rs12540554	0.90[ASN][1000 genomes]
rs12699614	0.88[CEU][hapmap]
rs1560575	0.89[CHB][hapmap];0.94[JPT][hapmap]
rs2357958	0.85[CHB][hapmap]
rs6461092	0.88[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap]
rs6962861	0.89[CHB][hapmap];0.94[JPT][hapmap]
rs6972732	0.89[CHB][hapmap];0.88[JPT][hapmap]
rs7780569	0.89[CHB][hapmap];0.94[JPT][hapmap]
rs7790717	0.90[ASN][1000 genomes]
rs7809958	0.90[ASN][1000 genomes]
rs891808	0.88[CHB][hapmap];0.94[JPT][hapmap];0.89[ASN][1000 genomes]
rs9639191	0.88[CHB][hapmap];0.94[JPT][hapmap];0.88[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv949033	chr7:14086106-14860323	Enhancers Flanking Active TSS Weak transcription Active TSS ZNF genes & repeats Strong transcription Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	8 gene(s)	inside rSNPs	diseases
2	nsv606281	chr7:14388381-14443963	Weak transcription Flanking Active TSS Enhancers Active TSS	n/a	n/a	inside rSNPs	diseases

No data

Chromatin state (count:0 , 50 per page) page:

No data

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