The 2.0 version of rSNPBase

Variant report

Variant rs6462032
Chromosome Location chr7:27589674-27589675
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:52 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr7:27559400-27627800 Weak transcription Psoas Muscle Psoas
2 chr7:27559800-27593000 Weak transcription Rectal Smooth Muscle rectum
3 chr7:27565600-27592200 Weak transcription Brain Substantia Nigra brain
4 chr7:27566800-27593200 Weak transcription Lung lung
5 chr7:27569600-27602200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
6 chr7:27573400-27590000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
7 chr7:27579000-27596000 Weak transcription Right Ventricle heart
8 chr7:27580600-27615000 Weak transcription Aorta Aorta
9 chr7:27581200-27591400 Weak transcription Brain Cingulate Gyrus brain
10 chr7:27581200-27591600 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
11 chr7:27581400-27591400 Weak transcription Brain Hippocampus Middle brain
12 chr7:27581400-27591600 Weak transcription Brain Inferior Temporal Lobe brain
13 chr7:27581400-27591800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
14 chr7:27581400-27594400 Weak transcription Sigmoid Colon Sigmoid Colon
15 chr7:27581400-27600200 Weak transcription Primary hematopoietic stem cells blood
16 chr7:27581400-27617400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
17 chr7:27581600-27594400 Weak transcription H1 Cell Line embryonic stem cell
18 chr7:27581600-27600200 Weak transcription Muscle Satellite Cultured Cells --
19 chr7:27581600-27602800 Weak transcription Duodenum Smooth Muscle Duodenum
20 chr7:27581800-27603000 Weak transcription Fetal Lung lung
21 chr7:27582200-27603000 Weak transcription Primary T cells from cord blood blood
22 chr7:27582400-27650800 Weak transcription Left Ventricle heart
23 chr7:27582600-27589800 Weak transcription Primary Natural Killer cells fromperipheralblood blood
24 chr7:27582600-27591600 Weak transcription Brain Anterior Caudate brain
25 chr7:27582800-27591600 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
26 chr7:27582800-27592200 Weak transcription Fetal Stomach stomach
27 chr7:27582800-27592400 Weak transcription Primary hematopoietic stem cells short term culture blood
28 chr7:27582800-27592600 Weak transcription Fetal Muscle Trunk muscle
29 chr7:27582800-27593000 Weak transcription Fetal Muscle Leg muscle
30 chr7:27582800-27594600 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
31 chr7:27582800-27595400 Weak transcription Breast Myoepithelial Primary Cells Breast
32 chr7:27582800-27600200 Weak transcription NHDF-Ad bronchial
33 chr7:27582800-27604800 Weak transcription Fetal Kidney kidney
34 chr7:27582800-27615000 Weak transcription Placenta Placenta
35 chr7:27582800-27615200 Weak transcription Ovary ovary
36 chr7:27583000-27593000 Weak transcription Liver Liver
37 chr7:27583200-27592800 Weak transcription Fetal Intestine Small intestine
38 chr7:27583200-27598800 Weak transcription Fetal Intestine Large intestine
39 chr7:27585800-27590200 Enhancers HUES48 Cell Line embryonic stem cell
40 chr7:27586200-27590200 Enhancers iPS-18 Cell Line embryonic stem cell
41 chr7:27586800-27594400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
42 chr7:27586800-27594400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
43 chr7:27587200-27594400 Weak transcription H9 Cell Line embryonic stem cell
44 chr7:27587400-27602600 Weak transcription Adipose Nuclei Adipose
45 chr7:27587800-27600200 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
46 chr7:27587800-27602600 Weak transcription HSMM muscle
47 chr7:27588600-27594800 Weak transcription A549 lung
48 chr7:27588600-27596400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
49 chr7:27589400-27594200 Weak transcription iPS-15b Cell Line embryonic stem cell
50 chr7:27589400-27594400 Weak transcription iPS-20b Cell Line embryonic stem cell

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Last update: Aug 31, 2015