Variant report

Variant rs12700822
Chromosome Location chr7:27645426-27645427
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:58 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr7:27582400-27650800 Weak transcription Left Ventricle heart
2 chr7:27600600-27645600 Weak transcription Colon Smooth Muscle Colon
3 chr7:27605800-27645800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
4 chr7:27609400-27651000 Weak transcription Breast Myoepithelial Primary Cells Breast
5 chr7:27615600-27657800 Weak transcription Aorta Aorta
6 chr7:27616000-27650800 Weak transcription Fetal Kidney kidney
7 chr7:27626600-27654800 Weak transcription Placenta Placenta
8 chr7:27626800-27646200 Weak transcription Ovary ovary
9 chr7:27626800-27655800 Weak transcription Primary hematopoietic stem cells blood
10 chr7:27627400-27645800 Weak transcription HSMM muscle
11 chr7:27628200-27658400 Weak transcription Duodenum Mucosa Duodenum
12 chr7:27628600-27658400 Weak transcription Primary T killer naive cells fromperipheralblood blood
13 chr7:27629600-27655400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
14 chr7:27630200-27654600 Weak transcription Primary B cells from cord blood blood
15 chr7:27630400-27656800 Weak transcription Stomach Smooth Muscle stomach
16 chr7:27632200-27655600 Weak transcription Primary T cells from cord blood blood
17 chr7:27633000-27645800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
18 chr7:27633400-27645600 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
19 chr7:27633400-27645600 Weak transcription Osteobl bone
20 chr7:27634200-27645800 Weak transcription Rectal Mucosa Donor 29 rectum
21 chr7:27638600-27645800 Weak transcription K562 blood
22 chr7:27642600-27646800 Enhancers iPS-15b Cell Line embryonic stem cell
23 chr7:27643000-27645800 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
24 chr7:27643400-27645800 Enhancers Hela-S3 cervix
25 chr7:27643400-27645800 Enhancers HepG2 liver
26 chr7:27643800-27645600 Weak transcription Fetal Lung lung
27 chr7:27644200-27646200 Enhancers Cortex derived primary cultured neurospheres brain
28 chr7:27644200-27646400 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
29 chr7:27644200-27655400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
30 chr7:27644400-27646800 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
31 chr7:27644400-27646800 Enhancers ES-UCSF4 Cell Line embryonic stem cell
32 chr7:27644400-27649200 Enhancers Fetal Intestine Small intestine
33 chr7:27644400-27658400 Weak transcription Primary T helper naive cells fromperipheralblood blood
34 chr7:27644600-27645600 Weak transcription ES-I3 Cell Line embryonic stem cell
35 chr7:27644600-27645600 Weak transcription H1 Cell Line embryonic stem cell
36 chr7:27644600-27645800 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
37 chr7:27644600-27645800 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
38 chr7:27644600-27646600 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
39 chr7:27644800-27645600 Enhancers Muscle Satellite Cultured Cells --
40 chr7:27644800-27645800 Enhancers NH-A brain
41 chr7:27644800-27646800 Enhancers HUES64 Cell Line embryonic stem cell
42 chr7:27645000-27645600 Enhancers Fetal Intestine Large intestine
43 chr7:27645000-27645600 Active TSS Pancreatic Islets Pancreatic Islet
44 chr7:27645000-27645800 Enhancers HUES48 Cell Line embryonic stem cell
45 chr7:27645000-27645800 Enhancers iPS-18 Cell Line embryonic stem cell
46 chr7:27645000-27646000 Weak transcription ES-WA7 Cell Line embryonic stem cell
47 chr7:27645000-27646400 Enhancers NHDF-Ad bronchial
48 chr7:27645000-27648200 Weak transcription HSMMtube muscle
49 chr7:27645000-27649000 Enhancers HUES6 Cell Line embryonic stem cell
50 chr7:27645200-27645600 Flanking Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell

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