The 2.0 version of rSNPBase

Variant report

Variant rs58747588
Chromosome Location chr7:27655470-27655471
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:82 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr7:27615600-27657800 Weak transcription Aorta Aorta
2 chr7:27626800-27655800 Weak transcription Primary hematopoietic stem cells blood
3 chr7:27628200-27658400 Weak transcription Duodenum Mucosa Duodenum
4 chr7:27628600-27658400 Weak transcription Primary T killer naive cells fromperipheralblood blood
5 chr7:27630400-27656800 Weak transcription Stomach Smooth Muscle stomach
6 chr7:27632200-27655600 Weak transcription Primary T cells from cord blood blood
7 chr7:27644400-27658400 Weak transcription Primary T helper naive cells fromperipheralblood blood
8 chr7:27645400-27655600 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
9 chr7:27646200-27655600 Weak transcription Fetal Muscle Leg muscle
10 chr7:27646200-27657800 Weak transcription Rectal Mucosa Donor 29 rectum
11 chr7:27646400-27655600 Weak transcription Fetal Stomach stomach
12 chr7:27646600-27656600 Weak transcription Rectal Mucosa Donor 31 rectum
13 chr7:27646600-27658400 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
14 chr7:27646800-27655600 Weak transcription HUES48 Cell Line embryonic stem cell
15 chr7:27646800-27657800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
16 chr7:27646800-27658800 Weak transcription Osteobl bone
17 chr7:27646800-27659600 Weak transcription H1 Cell Line embryonic stem cell
18 chr7:27647000-27655800 Weak transcription Ovary ovary
19 chr7:27647000-27657200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
20 chr7:27647000-27660200 Weak transcription Small Intestine intestine
21 chr7:27647200-27655600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
22 chr7:27647200-27655600 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
23 chr7:27648600-27655600 Weak transcription HepG2 liver
24 chr7:27648600-27659800 Weak transcription iPS-15b Cell Line embryonic stem cell
25 chr7:27648800-27657800 Weak transcription Skeletal Muscle Male skeletal muscle
26 chr7:27648800-27658200 Weak transcription Rectal Smooth Muscle rectum
27 chr7:27648800-27658200 Weak transcription HSMMtube muscle
28 chr7:27649000-27655800 Weak transcription HUES6 Cell Line embryonic stem cell
29 chr7:27649000-27658400 Weak transcription HUES64 Cell Line embryonic stem cell
30 chr7:27649200-27655600 Weak transcription Fetal Intestine Large intestine
31 chr7:27649200-27655600 Weak transcription Fetal Intestine Small intestine
32 chr7:27649200-27658000 Weak transcription K562 blood
33 chr7:27649200-27659400 Weak transcription iPS-20b Cell Line embryonic stem cell
34 chr7:27649400-27655600 Weak transcription Primary hematopoietic stem cells short term culture blood
35 chr7:27650000-27657000 Weak transcription A549 lung
36 chr7:27651200-27655600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
37 chr7:27651200-27655600 Weak transcription Fetal Lung lung
38 chr7:27651200-27655600 Weak transcription Left Ventricle heart
39 chr7:27651200-27655800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
40 chr7:27651200-27657200 Weak transcription Fetal Kidney kidney
41 chr7:27651200-27657800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
42 chr7:27651200-27658000 Weak transcription NHDF-Ad bronchial
43 chr7:27651200-27658600 Weak transcription Muscle Satellite Cultured Cells --
44 chr7:27651400-27655600 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
45 chr7:27651400-27658400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
46 chr7:27651600-27656800 Weak transcription NHEK skin
47 chr7:27651600-27657600 Weak transcription Fetal Heart heart
48 chr7:27651600-27659200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
49 chr7:27651800-27674200 Weak transcription Hela-S3 cervix
50 chr7:27652200-27657600 Weak transcription Adipose Nuclei Adipose

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Last update: Aug 31, 2015