Variant report

Variant rs6462038
Chromosome Location chr7:27660450-27660451
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:55 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr7:27651800-27674200 Weak transcription Hela-S3 cervix
2 chr7:27654400-27696400 Weak transcription Gastric stomach
3 chr7:27655400-27665200 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --
4 chr7:27655600-27660600 ZNF genes & repeats Fetal Intestine Small intestine
5 chr7:27657200-27662200 ZNF genes & repeats Ganglion Eminence derived primary cultured neurospheres brain
6 chr7:27657400-27661800 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Female --
7 chr7:27657400-27661800 ZNF genes & repeats Fetal Intestine Large intestine
8 chr7:27657400-27662600 ZNF genes & repeats Breast Myoepithelial Primary Cells Breast
9 chr7:27658000-27661400 ZNF genes & repeats Pancreatic Islets Pancreatic Islet
10 chr7:27658200-27661200 ZNF genes & repeats Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
11 chr7:27658200-27661400 ZNF genes & repeats Primary T cells fromperipheralblood blood
12 chr7:27658400-27661000 ZNF genes & repeats Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
13 chr7:27658400-27661000 ZNF genes & repeats Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
14 chr7:27658400-27661200 ZNF genes & repeats HUES64 Cell Line embryonic stem cell
15 chr7:27658400-27661200 ZNF genes & repeats Fetal Lung lung
16 chr7:27658400-27661400 ZNF genes & repeats Liver Liver
17 chr7:27658400-27662000 ZNF genes & repeats Dnd41 blood
18 chr7:27658600-27661000 ZNF genes & repeats Brain Substantia Nigra brain
19 chr7:27658600-27661000 ZNF genes & repeats Skeletal Muscle Female skeletal muscle
20 chr7:27658600-27661200 ZNF genes & repeats hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
21 chr7:27658600-27661200 ZNF genes & repeats Duodenum Smooth Muscle Duodenum
22 chr7:27658800-27687800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
23 chr7:27658800-27688600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
24 chr7:27659200-27660800 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
25 chr7:27659200-27660800 ZNF genes & repeats Primary T helper memory cells from peripheral blood 1 blood
26 chr7:27659200-27661200 ZNF genes & repeats Monocytes-CD14+_RO01746 blood
27 chr7:27659400-27661000 ZNF genes & repeats Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
28 chr7:27659400-27661000 ZNF genes & repeats A549 lung
29 chr7:27659600-27660600 ZNF genes & repeats HUES48 Cell Line embryonic stem cell
30 chr7:27659600-27660800 ZNF genes & repeats HUES6 Cell Line embryonic stem cell
31 chr7:27659600-27661000 ZNF genes & repeats HSMM muscle
32 chr7:27659600-27661400 ZNF genes & repeats H1 Cell Line embryonic stem cell
33 chr7:27659800-27660600 ZNF genes & repeats Rectal Mucosa Donor 29 rectum
34 chr7:27659800-27661000 ZNF genes & repeats HepG2 liver
35 chr7:27659800-27661600 ZNF genes & repeats Primary Natural Killer cells fromperipheralblood blood
36 chr7:27659800-27672800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
37 chr7:27659800-27675400 Weak transcription Skeletal Muscle Male skeletal muscle
38 chr7:27659800-27679000 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
39 chr7:27660000-27661000 Strong transcription Placenta Placenta
40 chr7:27660000-27661200 Weak transcription Aorta Aorta
41 chr7:27660000-27661200 Weak transcription Lung lung
42 chr7:27660000-27664400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
43 chr7:27660000-27667600 Weak transcription Muscle Satellite Cultured Cells --
44 chr7:27660000-27669800 Weak transcription Left Ventricle heart
45 chr7:27660000-27680600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
46 chr7:27660200-27661000 Weak transcription Primary hematopoietic stem cells short term culture blood
47 chr7:27660200-27661000 ZNF genes & repeats Stomach Smooth Muscle stomach
48 chr7:27660200-27661800 ZNF genes & repeats Duodenum Mucosa Duodenum
49 chr7:27660200-27668000 Weak transcription Osteobl bone
50 chr7:27660200-27674600 Weak transcription Rectal Smooth Muscle rectum

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