The 2.0 version of rSNPBase

Variant report

Variant rs6462938
Chromosome Location chr7:39692640-39692641
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:80 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr7:39666200-39694400 Weak transcription Fetal Brain Female brain
2 chr7:39667200-39698800 Weak transcription Fetal Kidney kidney
3 chr7:39671800-39693800 Weak transcription A549 lung
4 chr7:39672200-39722800 Weak transcription Hela-S3 cervix
5 chr7:39674200-39696000 Weak transcription Thymus Thymus
6 chr7:39675200-39708800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
7 chr7:39675600-39701400 Weak transcription Fetal Muscle Trunk muscle
8 chr7:39676600-39694400 Weak transcription Primary monocytes fromperipheralblood blood
9 chr7:39676600-39694400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
10 chr7:39676600-39694400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
11 chr7:39677400-39694200 Weak transcription Monocytes-CD14+_RO01746 blood
12 chr7:39678800-39694400 Weak transcription Primary B cells from peripheral blood blood
13 chr7:39679600-39695800 Weak transcription Primary B cells from cord blood blood
14 chr7:39680000-39700800 Weak transcription Primary Natural Killer cells fromperipheralblood blood
15 chr7:39680000-39701000 Weak transcription Esophagus oesophagus
16 chr7:39680000-39721600 Weak transcription Primary T helper naive cells from peripheral blood blood
17 chr7:39680800-39704200 Weak transcription Primary T killer memory cells from peripheral blood blood
18 chr7:39680800-39716400 Weak transcription Primary T regulatory cells fromperipheralblood blood
19 chr7:39682000-39700600 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
20 chr7:39682000-39704000 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
21 chr7:39682000-39704000 Weak transcription Sigmoid Colon Sigmoid Colon
22 chr7:39682400-39694400 Weak transcription Fetal Intestine Large intestine
23 chr7:39682400-39700600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
24 chr7:39682600-39696000 Weak transcription Rectal Mucosa Donor 31 rectum
25 chr7:39682600-39702600 Weak transcription Gastric stomach
26 chr7:39682800-39722000 Weak transcription Rectal Mucosa Donor 29 rectum
27 chr7:39683400-39701200 Weak transcription Lung lung
28 chr7:39683400-39716600 Weak transcription Primary T cells fromperipheralblood blood
29 chr7:39683600-39696600 Weak transcription Pancreas Pancrea
30 chr7:39683600-39712600 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
31 chr7:39684000-39694600 Weak transcription iPS-20b Cell Line embryonic stem cell
32 chr7:39685400-39693200 Weak transcription HMEC breast
33 chr7:39686200-39704400 Weak transcription Fetal Adrenal Gland Adrenal Gland
34 chr7:39687400-39715000 Weak transcription Primary T helper cells fromperipheralblood blood
35 chr7:39687800-39694400 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
36 chr7:39688000-39697800 Weak transcription Primary T killer naive cells fromperipheralblood blood
37 chr7:39688400-39694200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
38 chr7:39688400-39696200 Weak transcription Primary T cells from cord blood blood
39 chr7:39688400-39700600 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
40 chr7:39688400-39702200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
41 chr7:39688600-39694000 Weak transcription Primary hematopoietic stem cells blood
42 chr7:39688600-39694400 Weak transcription Primary hematopoietic stem cells short term culture blood
43 chr7:39689200-39693000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
44 chr7:39689200-39694200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
45 chr7:39689200-39694400 Weak transcription Fetal Stomach stomach
46 chr7:39689200-39703800 Weak transcription Psoas Muscle Psoas
47 chr7:39690200-39706600 Weak transcription Fetal Heart heart
48 chr7:39690400-39693600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
49 chr7:39690600-39694200 Weak transcription Fetal Muscle Leg muscle
50 chr7:39690600-39694400 Weak transcription NHEK skin

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Last update: Aug 31, 2015