Variant report

Variant rs6477091
Chromosome Location chr9:6567464-6567465
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:60 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr9:6532000-6570400 Strong transcription Liver Liver
2 chr9:6554600-6568600 Weak transcription Fetal Intestine Small intestine
3 chr9:6558600-6586600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
4 chr9:6558800-6580800 Weak transcription iPS-15b Cell Line embryonic stem cell
5 chr9:6559200-6583400 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
6 chr9:6559600-6568200 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
7 chr9:6559800-6567600 Strong transcription HUES6 Cell Line embryonic stem cell
8 chr9:6560200-6569400 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
9 chr9:6560200-6572200 Weak transcription GM12878-XiMat blood
10 chr9:6561200-6591000 Weak transcription Placenta Placenta
11 chr9:6563400-6583000 Weak transcription H1 Cell Line embryonic stem cell
12 chr9:6564400-6568000 Enhancers Brain Hippocampus Middle brain
13 chr9:6564600-6568000 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
14 chr9:6564800-6568200 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
15 chr9:6565400-6575200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
16 chr9:6565400-6586400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
17 chr9:6565600-6568200 Enhancers Fetal Adrenal Gland Adrenal Gland
18 chr9:6565600-6569400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
19 chr9:6565600-6577000 Weak transcription Cortex derived primary cultured neurospheres brain
20 chr9:6566400-6575400 Weak transcription iPS-18 Cell Line embryonic stem cell
21 chr9:6566600-6567600 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
22 chr9:6566600-6567600 Enhancers K562 blood
23 chr9:6566600-6579800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
24 chr9:6566800-6567600 Enhancers ES-I3 Cell Line embryonic stem cell
25 chr9:6566800-6567600 Enhancers Brain Angular Gyrus brain
26 chr9:6566800-6567600 Flanking Active TSS Hela-S3 cervix
27 chr9:6566800-6567600 Flanking Active TSS HSMM muscle
28 chr9:6566800-6567600 Flanking Active TSS Osteobl bone
29 chr9:6566800-6567800 Flanking Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
30 chr9:6566800-6567800 Flanking Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
31 chr9:6566800-6567800 Enhancers Primary T helper 17 cells PMA-I stimulated --
32 chr9:6566800-6567800 Flanking Active TSS HUVEC blood vessel
33 chr9:6566800-6567800 Flanking Active TSS NH-A brain
34 chr9:6566800-6568000 Flanking Active TSS NHDF-Ad bronchial
35 chr9:6566800-6568200 Flanking Active TSS Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
36 chr9:6566800-6568200 Flanking Active TSS Muscle Satellite Cultured Cells --
37 chr9:6566800-6572800 Weak transcription iPS-20b Cell Line embryonic stem cell
38 chr9:6567000-6567600 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
39 chr9:6567000-6567600 Enhancers Brain Dorsolateral Prefrontal Cortex brain
40 chr9:6567000-6568200 Enhancers Brain Cingulate Gyrus brain
41 chr9:6567000-6575400 Weak transcription HUES64 Cell Line embryonic stem cell
42 chr9:6567000-6581000 Weak transcription HUES48 Cell Line embryonic stem cell
43 chr9:6567200-6567600 Flanking Active TSS Brain Inferior Temporal Lobe brain
44 chr9:6567200-6567600 Flanking Active TSS HSMMtube muscle
45 chr9:6567200-6567800 Flanking Active TSS A549 lung
46 chr9:6567200-6568200 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
47 chr9:6567200-6568200 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
48 chr9:6567200-6568400 Enhancers Placenta Amnion Placenta Amnion
49 chr9:6567200-6569200 Enhancers HMEC breast
50 chr9:6567400-6567600 Flanking Active TSS IMR90 fetal lung fibroblasts Cell Line lung

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